Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4978 ATGGTGTTGGCTTCACCAAAACCAATTAGGAATGAAACAATTTTACCAAATGATCTTATTCCAATAGTGGACCTTAAGGGTGAAAGGTCAGAGGTAATAAAACAAATTGTGAAAGCAAGTGAAGAGTATGGTTTCTTCAAAGTGATAAACCATGGTATTAGTGATGAAACTATCGACAAAATGGAAGAGGCAGGGTTTAGTTTCTTTGCAAAACCAATGTCTCAAAAGAAACAAGCTGCACCTGCTTATGGTTCTAAGAACATAGGATTCAATGGAGATATTGGTGAGGTTGAGTATCTTCTCCTCAATGCTAACACTTCCTCCATTGCTCAAATATCCAAAACTATATCCAATGATGATCCGCATTCTAACTTCAGGTGTAGGGTGAGTGAATATACAGAGGCAGTGAAAGAGGTGGCATGTGAGATATTAGAGTTAATGGCAGAGGGTTTGGGGGTCCCTGATACAAAGGCATTCAGCAGTTTGATAAAGGATATTGATAGTGACTCAGTTCTTAGGCTAAATCACTACCCACCTATACTTAACAAGGACAAGTCACATTCCAACAATGTTGGCTTTGGGGAGCATTCTGACCCTCAGATCTTGACCATTCTTAGATCCAATGACGTTTCTGGTCTTCAAATTTCTCTTCAACATGGTCTCTGGATTCCTGTTAACCCTGACCCTGAAGCTCTCTGTGTTAATATAGGTGATGTCCTTGAGGTTATGACAAATGGAAGGTTTGTAAGCGTGAGACATAGGGCAATGACAAACTCATGCAAATCAAGAATGTCAATGGCATATTTTGGGGCTCCACCTCTAAATGCTTCCATTGTTGCTCCACCAGTTTTGGTTACACCAACCAGGCCCTCTCTCTTCAGACCATTTACTTGGGCCGACTACAAAAAAGCCACTTACTCTCTAAGGCTTGGTGACACCAGAATTCAACTTTTCAGAGCAAACATGGCATGA 972 0.4084 MVLASPKPIRNETILPNDLIPIVDLKGERSEVIKQIVKASEEYGFFKVINHGISDETIDKMEEAGFSFFAKPMSQKKQAAPAYGSKNIGFNGDIGEVEYLLLNANTSSIAQISKTISNDDPHSNFRCRVSEYTEAVKEVACEILELMAEGLGVPDTKAFSSLIKDIDSDSVLRLNHYPPILNKDKSHSNNVGFGEHSDPQILTILRSNDVSGLQISLQHGLWIPVNPDPEALCVNIGDVLEVMTNGRFVSVRHRAMTNSCKSRMSMAYFGAPPLNASIVAPPVLVTPTRPSLFRPFTWADYKKATYSLRLGDTRIQLFRANMA* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4978 323 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 320 - -
Mal5g4978 323 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 167 272 IPR005123 -
Mal5g4978 323 Pfam non-haem dioxygenase in morphine synthesis N-terminal 20 82 IPR026992 -
Mal5g4978 323 Pfam 2OG-Fe(II) oxygenase superfamily 169 270 IPR044861 -
Mal5g4978 323 Gene3D - 4 303 IPR027443 -
Mal5g4978 323 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 320 - -
Mal5g4978 323 SUPERFAMILY Clavaminate synthase-like 18 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4978 Mal-Chr5 123274834 123277930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4978 20 319 Glycosyltransferase AT5G59530 28.213 2.50e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4978 K04125 - gmx:100783917 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4978 5 123274834 123277930 Mal5g4978 5 123274834 123277930 ECH