Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4950 ATGTCGAAGCCATTAGCATTAGCTTTAATCTTGTGCACTATTGTTCCAAGCTACTGCACAATTATCCATCCAAAATCAAAAGCAAATCTAATACAACAAACTTGCAAGCAAACTCCAAATTATGCAATTTGCATTCAGTATCTCAAATCTGATCCAAGAAGCTCTGATGCAGCAGATGTAACAGGTCTAGCACTAATCATGGTGGACATAATGAAATCCAAAGCAAACACTGCCTTAAACAAAATCAATCAGTTGATTAAGGGGAACCATGAACCTGAAGCTTTGAATTCATGTGCTGGTAGATACAGAGCAATTTTGGTAGCTGATGTACCAAAATCTGTTGCAGCTTTGAAACAAGGGGATCCTAAATTTGCAGAAGATGGTGCAAATGATGTAGCAATTGAAGCCACTAACTGCGAGAATGGATTCAAAGGAAAATCACCACTCTCTGATGAAAATATTGCTATGCATGATGTAGCAGTCATAACAGCAGCTATTGTTAAACAATTGCTGTAG 516 0.3779 MSKPLALALILCTIVPSYCTIIHPKSKANLIQQTCKQTPNYAICIQYLKSDPRSSDAADVTGLALIMVDIMKSKANTALNKINQLIKGNHEPEALNSCAGRYRAILVADVPKSVAALKQGDPKFAEDGANDVAIEATNCENGFKGKSPLSDENIAMHDVAVITAAIVKQLL* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4950 171 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 170 IPR035513 -
Mal5g4950 171 CDD CIF_like 28 170 IPR034087 GO:0004857|GO:0043086
Mal5g4950 171 Pfam Plant invertase/pectin methylesterase inhibitor 29 166 IPR006501 GO:0004857
Mal5g4950 171 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 170 IPR006501 GO:0004857
Mal5g4950 171 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 13 171 - -
Mal5g4950 171 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 171 - -
Mal5g4950 171 SMART PMEI_2 26 166 IPR006501 GO:0004857
Mal5g4950 171 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 171 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4950 Mal-Chr5 123064270 123064785 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4950 - - mtr:MTR_4g122760 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4950 5 123064270 123064785 Mal5g4950 5 123064270 123064785 ECH