Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4908 ATGGCGGACAAGTACAACATGAAGAATCCAGCTGTGAAGCGGATTCTCCAAGAGGTCAAAGAAATGCAATCAAACCCTTCCGATGATTTCATGAGCCTTCCTCTCGAGGAAAATATATTTGAATGGCAATTTGCAATTAGAGGGCCACGTGAAACTGAATTTGAAGGTGGTATTTATCATGGAAGGATTCAATTACCTGCTGAATATCCATTCAAACCTCCTTCATTTATGTTGTTGACTCCTAATGGTCGTTTCGAGACTCAAACTAAGATTTGTTTGAGCATATCAAATCATCATCCTGAGCATTGGCAACCATCATGGAGTGTGAGAACTGCTCTAGTTGCACTGATTGCATTCATGCCCACCAACCCAAATGGTGCCTTGGGCTCATTAGACTACAAGAAAGAAGATAGGCGTGCCTTGGCCATTAAGTCCCGTGAAGCATCTCCAAAATTTGGGACTCCTGAACGTCAAAAACTGATTGATGAGATACATGAGTATATGCTAAGCAAGGCAGTCGCTGCTCCACAACCTAGCCCTCCGCAGGCTTCTGAAGAACCCAAAAATGAGGAGGCCGAGACCCAAGTTACTTTGCAAAATCCTGAGGCTCTACCCGCAGGAGAGGAGGGGATTCCAGATCAAGCAGGTGACAGAATAGTTGAAGAACAAGAAGCCCCTGCCAATGTTAATCCTAACCCGGCAGGAGTTGAAGCTTCAAATGAGACTCCATCAGGCGTCTCAAGCAATCAGTTGCCCCGAACGTCAGAGACAAGGGTTCAAAATCTGAAACCAGAGACAAGGGTGCAGAAACCTGATGACCGATTGTTCACTCTGGCAGCCATTGGACTTGCTATAGCAATTATGGTTCTTTTGCTGAAGAAATTCATTAAATCTACAGAACATGGAGCAGTTTTCATGAATGGGTCTTAG 930 0.4462 MADKYNMKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPRETEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEDRRALAIKSREASPKFGTPERQKLIDEIHEYMLSKAVAAPQPSPPQASEEPKNEEAETQVTLQNPEALPAGEEGIPDQAGDRIVEEQEAPANVNPNPAGVEASNETPSGVSSNQLPRTSETRVQNLKPETRVQKPDDRLFTLAAIGLAIAIMVLLLKKFIKSTEHGAVFMNGS* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4908 309 MobiDBLite consensus disorder prediction 174 212 - -
Mal5g4908 309 MobiDBLite consensus disorder prediction 226 266 - -
Mal5g4908 309 PANTHER BNAC01G21910D PROTEIN 6 309 - -
Mal5g4908 309 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 173 IPR000608 -
Mal5g4908 309 CDD UBCc 12 151 IPR000608 -
Mal5g4908 309 Pfam Ubiquitin-conjugating enzyme 14 125 IPR000608 -
Mal5g4908 309 Gene3D Ubiquitin Conjugating Enzyme 2 180 IPR016135 -
Mal5g4908 309 SUPERFAMILY UBC-like 11 132 IPR016135 -
Mal5g4908 309 MobiDBLite consensus disorder prediction 233 262 - -
Mal5g4908 309 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 6 309 - -
Mal5g4908 309 SMART ubc_7 13 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4908 Mal-Chr5 122497795 122499946 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4908 1 307 Miscellaneous Gene Families AT3G17000 65.815 2.09e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4908 K10578 - gmx:100804054 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4908 5 122497795 122499946 Mal5g4908 5 122497795 122499946 ECH