Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4604 ATGTACTTGGTGAGTTTCAGCTTCAGCTTCATTGGAGTTAATGGAATAGGAAATGCTTCAGATGTGAAAGGGGTTGTTGTCATTCATGGTAAAGCTTTTATTGGAAGGATTGATAATGATTTTGTTTGTGCAACTATTGATTGGTGGCCACCTCAGAAATGTGACTTTGGAAAATGCAGTTGGGATCATGCTTCTCTGCTTAATCTGGACCTCAACAACCAAATTTTGTTAAATGCAGTAAAAGCCTTTTCACCCTTGAAAATTAGATTGGGTGGTACCTTGCAAGATATAGTCACATATGGAACTGAAGATAATAAAGAACCTTGTACTCCATTTGCTCCAAGCTCTAAAGAAAAGCCTGATTTTGGTTTCACTAAAGGGTGCTTACCAATGCAAAGATGGGATGAGCTAAACAGCTTTTTCCAAAAAGCAGGGGTTAATGTTATATTTGGATTAAATGCTCTTGCTGGAAGATCTTATGAATCTGGTTCTTCTGTTGGACCTTGGAACTACGCTAATGCCGAGTCTTTTATACGTTACACTGTTGCAAAGAAGTACACTATTCATGGTTGGGAATTTGGTAATGAATTGTGTGGAGTTGGAATTGTAACAAGGGTTGCTGCAGATCAATATGCTTCTGATGTAGTTGTTTTAAGAAAGATAGTTCAAGATGTATATAGAGGCGTTAAGCCAAAGCCACTAATCCTTGCACCTGGAGGCTTCTTTGATGCAAATTGGTTTAAGGAATTCTTAAACAAATCGGACGAATCCGCAAATGCGGTCACTCACCACATTTATAACCTTGGACGAGGTGATGATCAACACTTAGTCGAAAGAATTCTCGATCCAACCTCTCTTGATAAAGCGGCTGACACATTCAGAAGCCTTAAAAATGTACTTCAAAGTTCAAGAACGTCAGCTAAAGCATGGGTTGGTGAAGCAGGAGGGACTTACAGTAGTGGTCAACATCTGGTGTCTGATGCATTTGTCAATAGCTTTTGGTATTTGGACCAGCTTGGTATGTCAGCTACTTATGGCACCAGAACATATTGCAGGCAAACTTTGATAGGAGGAAACTATGGTTTATTGAATACCACTACTTTCATGCCAAATCCAGACTATTATAGTGCTCTTCTTTGGCACCGACTCATGGGAGAACGTGTCTTGTCAACTACCTTCTATGGAACAAAGAAGATCAGAACTTATGCACATTGTGCAAAGGAATATAAGGGAATCACAATATTGTTTCTCAATTTGGACAACAACACCACTGTTCAGTCCAGAGTGGTCTTAAATTTTGCGACGAAGCCATCTCCTCCTCATGTGGGAGAATCACAGAGAAGAGAGTACCATTTAACAGCAAAGGATGGAAATTTACATAGCCAAACTATGTTACTAAATGGAAACATTTTAAGTGTAAATTCAGCTGGTGATATTCCTTCATTGAACCCTATATATGTTGATTCTTCAATGCCAATAACAGTTAGGCCTCTTTCTATTGTATTTGCTCATATACCAGATGCTGCTATTAAAGCTTGCAGCTAG 1545 0.3903 MYLVSFSFSFIGVNGIGNASDVKGVVVIHGKAFIGRIDNDFVCATIDWWPPQKCDFGKCSWDHASLLNLDLNNQILLNAVKAFSPLKIRLGGTLQDIVTYGTEDNKEPCTPFAPSSKEKPDFGFTKGCLPMQRWDELNSFFQKAGVNVIFGLNALAGRSYESGSSVGPWNYANAESFIRYTVAKKYTIHGWEFGNELCGVGIVTRVAADQYASDVVVLRKIVQDVYRGVKPKPLILAPGGFFDANWFKEFLNKSDESANAVTHHIYNLGRGDDQHLVERILDPTSLDKAADTFRSLKNVLQSSRTSAKAWVGEAGGTYSSGQHLVSDAFVNSFWYLDQLGMSATYGTRTYCRQTLIGGNYGLLNTTTFMPNPDYYSALLWHRLMGERVLSTTFYGTKKIRTYAHCAKEYKGITILFLNLDNNTTVQSRVVLNFATKPSPPHVGESQRREYHLTAKDGNLHSQTMLLNGNILSVNSAGDIPSLNPIYVDSSMPITVRPLSIVFAHIPDAAIKACS* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4604 514 PANTHER HEPARANASE-RELATED 16 513 - -
Mal5g4604 514 PANTHER HEPARANASE-LIKE PROTEIN 3 16 513 - -
Mal5g4604 514 Pfam Glycosyl hydrolase family 79, N-terminal domain 24 340 IPR005199 GO:0016020|GO:0016798
Mal5g4604 514 Gene3D Glycosidases 55 382 - -
Mal5g4604 514 SUPERFAMILY (Trans)glycosidases 37 384 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4604 Mal-Chr5 118664109 118667066 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4604 23 514 Glycoside Hydrolase AT5G07830 45.455 1.08e-164 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4604 K07964 - gmx:100778008 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4604 5 118664109 118667066 Mal5g4604 5 118664109 118667066 ECH
Mal5g4604 5 118664109 118667066 Mal4g2597 4 70227430 70231732 PCT