Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4456 ATGACAGATGCAAGACTAGATACACCCTTGATGCCAAATTCATCCAGGAATCTACCTGATTTCAAGAATTCTGTTAAATTGAAGTATGTTAAACTTGGTTATCACTATCTAATCACTCATGGAATGTACCTTTTTCTTTCCCCACTTGTGGTGTTGATTGCTGCTCAGATATCCACTTTTTCCATCCATGACTTTTATGATCTTTGGGAGCATTTGCAATACAATTTGATATCTGTCATTTTTTGCTCAACTCTCCTTGTTTTTCTATCCACGCTTTACTTTTTGACTCGTCCGAAACCGGTGTACCTTGTTGATTTCTCATGTTACAAGCCTGAAGAATCGCGCAAGTGCACAAAAAGGAAATTTATGGATCAGTCCCGGATGATTGGTACTTTTACCGAGGAAAGTCTCGAATTTCAGCGAAAGATTCTTGAGAGATCGGGCCTTGGGGAATCTACTTATCTTCCAGAGGCTGTTCTTAACTTTCCTCCTAACCCTTCAATGAAAGAGGCTAGAAAAGAAGCTGAGACTGTGATGTTTGGTGCCATTGATGAGTTATTTAGTAAGACCTCAGTAAATCCTAAAGATATAGGAATTCTGATTGTAAATTGTAGCCTGTTCAACCCAACTCCGTCGCTATCTGCAATGATTGTCAATCATTACAAGCTTCGAGGGAATATAAAGAGCTACAACCTAGGTGGGATGGGTTGCAGTGCGGGGCTGATCTCGATTGATCTTGCTAAAGATCTTCTCCAGGCCAATCCTAACTCGTATGTGTTGGTCATTAGCATGGAGAATATCACATTGAATTGGTATTTTGGAAACGATCGGTCGAAACTTGTTTCTAATTGTTTGTTTCGAATGGGAGGAGCTGTGGTTCTGCTTTCGAATAAAAGCTCAGACAGAAGAAGATCGAAATACCAATTGATCACCACGGTTCGCACTAACAAGGCTTCTGATGACAAGTGTTTTAGCTGTGTAACCCAAGAAGAAGATGCCAATGGCAAGATCGGTGTTACCTTGTCAAAAGATCTTATGGCAGTTGCCGGTGATGCTTTAAAAACCAATATCACTACGCTAGGGCCTCTCGTACTTCCAACATCAGAACAACTACTATTCTTCACCACATTGCTTTTGAACATTTTTTGCATCCATGCCGGAGGTAGAGCTGTTTTGGATGAGCTGGAGAAAAACTTGCAGCTATCTCCGTGGCATATGGAGCCATCGAGGATGACACTTTATCGTTTCGGAAACACATCTAGCAGTTCACTTTGGTATGAACTGGCTTACACAGAAGCCAAAGGGAGGATCAAGAAGGGAGGCAGAACATGGCAAATAGCATTTGGTTCTGGATTCAAGTGTAACAGTGCAGTGTGGAAGGCTCTCAGGACGATCGACCCTGTGAAGGAGAAAAGCCCTTGGATAGATGAGATTGACCAGTTTCCTGTTGATGTTCCAAAGGTATCTACCATCTAA 1476 0.418 MTDARLDTPLMPNSSRNLPDFKNSVKLKYVKLGYHYLITHGMYLFLSPLVVLIAAQISTFSIHDFYDLWEHLQYNLISVIFCSTLLVFLSTLYFLTRPKPVYLVDFSCYKPEESRKCTKRKFMDQSRMIGTFTEESLEFQRKILERSGLGESTYLPEAVLNFPPNPSMKEARKEAETVMFGAIDELFSKTSVNPKDIGILIVNCSLFNPTPSLSAMIVNHYKLRGNIKSYNLGGMGCSAGLISIDLAKDLLQANPNSYVLVISMENITLNWYFGNDRSKLVSNCLFRMGGAVVLLSNKSSDRRRSKYQLITTVRTNKASDDKCFSCVTQEEDANGKIGVTLSKDLMAVAGDALKTNITTLGPLVLPTSEQLLFFTTLLLNIFCIHAGGRAVLDELEKNLQLSPWHMEPSRMTLYRFGNTSSSSLWYELAYTEAKGRIKKGGRTWQIAFGSGFKCNSAVWKALRTIDPVKEKSPWIDEIDQFPVDVPKVSTI* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4456 491 SUPERFAMILY Thiolase-like 312 460 IPR016039 GO:0016746
Mal5g4456 491 Pfam Chalcone and stilbene synthases, C-terminal domain 382 458 IPR012328 -
Mal5g4456 491 Gene3D - 102 461 IPR016039 GO:0016746
Mal5g4456 491 SUPERFAMILY Thiolase-like 87 305 IPR016039 GO:0016746
Mal5g4456 491 CDD CHS_like 86 459 - -
Mal5g4456 491 PANTHER 3-KETOACYL-COA SYNTHASE 5 378 - -
Mal5g4456 491 PANTHER 3-KETOACYL-COA SYNTHASE 379 490 - -
Mal5g4456 491 PANTHER 3-KETOACYL-COA SYNTHASE 5 378 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mal5g4456 491 PANTHER 3-KETOACYL-COA SYNTHASE 379 490 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mal5g4456 491 PIRSF Very_long_ch_3-ktacl-CoA_syn 20 381 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mal5g4456 491 PIRSF Very_long_ch_3-ktacl-CoA_syn 374 491 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mal5g4456 491 Pfam FAE1/Type III polyketide synthase-like protein 93 378 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4456 Mal-Chr5 116361411 116362944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4456 3 491 Miscellaneous Gene Families AT2G26640 78.740 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4456 K15397 - gmx:100817884 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4456 5 116361411 116362944 Mal5g4456 5 116361411 116362944 ECH
Mal5g4456 5 116361411 116362944 Mal4g2372 4 59769169 59770704 PCT