Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4425 ATGGTTACCGGAGCACCAATAATGAATTCTGTAAAGACTGATGAAATTGCACAACCCACCAAGACCAAGAAAAGGGTCAGGGTGAAAAAGGAACTATCTTTTCAAGATTTGTATCAAAACCAAGACTTGTTTGCTGCTGATGATGATGATGACGAGGACGATGATTGGGACCCATCTCAGAAGCAAGCTGATGGAGTTGGTGAGAGCTCCGTTTCCGATGCATGTGATCAAGTTTCAGAAGTCAAGCCACAGCCTAATGCCAAAAGGATCAGGGTGAAAAAGGAACTAACTTTTCAGGATTTGTATCAAAACCAAGACTTGTTTGATGATGATGACGACGAGGACGATGATTGGGACCCATCTCAAAAGCAAGCTGATGGAGTTGGTGAGAGCTCCGTTTCTGATGCATGTGATGAAGTTTCAGAAGTCAAGCCACAACCTAATGCCAAAAGGATCAAGGTGCAAAAGGAACTAACTTTTCAGGATCTGTATCAAAGCCAAGAGTTGTTTGACGAGGATGATGAGGAGGACGATGATTGGGACCCGTCTCAGTTGCAGAAGTGTGTCGAAGTCATCAAGTGGCTCTGTAAAAATTGTACTATGGATAACCTAAACAATGATGTCTGTTGCCAGATATGTGGGGAGCATAAAGATTCTAAAATCCTGAGCCGTGGGCATTTTGCATCTCCCTTTGCACAAGATGAAGATCCGGATGAGATCCAACCAAGTATAAAAAGGCTGAAAGATGTCGACTCACTGGAATCAGCAGCAAACAGTTCTACGGCAATTGGCTTTGATGAAAGAATGTTGTTACATGCAGAAGTTGAAATGAAACCACATCCACACCCCGAAAGGCCAGATCGACTTCGAGCAATTGCTGCTAGTCTTGCCAGAGCTGGTATATTTCCAGGAAGATGCCATTCAATTCCTGCTAGAGAAATCACTCAAGAAGAACTGATGATGGTTCATTCTTCGGAGCATATTGAATCTGTGGAAGTTACAAGCAAGTTAATGTCTAGTTATTTTACTTCCGACACATACGCCAATGAGCATTCAGCATGTGCTGCTAGGTTGGCAGCTGGGTTATGTGCTGATCTGGCATCGGCAGTTGTTTCTGGGCGTGCCAAAAATGGATTTGCTTTGGTTAGACCTCCTGGTCATCATGCCGGTGTAAAAGATGTGATGGGGTTTTGCCTTCACAATAATGCTGCAGTGGCAGCATTGGCGGCTCAGGCTGCAGGGGCTAGGAAAGTGCTAATTTTAGATTGGGATGTTCATCACGGAAATGGCACTCAGGAAATATTTGAGCAAAACAAATCAGTCTTGTATATATCATTGCATAGACATGAGGATGGAACGTTTTATCCCGGTACTGGAGGTGCTCATGAGGTTGGTTATATGGGTGCAGAAGGTTACTGTGTGAATATTCCATGGAGTCGAGGTGGTGTTGGTGATAATGATTACATTTTTGCATTTCAGCATGTTGTACTTCCTATAGCTTCTGAATTTGCTCCAGATTTTACTATAATATCAGCAGGATTTGATGCTGCTAGAGGTGATCCCCTTGGAGGTTGTGATATTACTCCCTCTGGCTATGCACAGATGACACACATGTTGAATGCCCTTTCTGGTGGAAAAATGCTTGTTATTCTTGAGGGGGGCTATAATCTTCGTTCTATATCATCTTCTGCAACTGCAGTAATCAAGGTATTACTGGGTGAGAGCCCTGTACGTGAACTGGAAAATAATTTTCCTACCAAATCTGGCCTCCAAACTGTTTTCGAAGTCCTCGACATTCAGAATAATTTTTGGCCGTCCTTGAAACCTATCTTTAAAAATGTGATGTCACTTTGGGAAATGCAATGTCTTGGGAAAAAAAGCAAACAGAGAAAAAAGAGACGCCGAATTTTGGCGCCAATGTGGTGGAGGTGGAGTCGCAGAAATTTCTTATTCCATATGCTGAATGGGCATGTTCGTGTAAAATCAAAATGA 1992 0.4292 MVTGAPIMNSVKTDEIAQPTKTKKRVRVKKELSFQDLYQNQDLFAADDDDDEDDDWDPSQKQADGVGESSVSDACDQVSEVKPQPNAKRIRVKKELTFQDLYQNQDLFDDDDDEDDDWDPSQKQADGVGESSVSDACDEVSEVKPQPNAKRIKVQKELTFQDLYQSQELFDEDDEEDDDWDPSQLQKCVEVIKWLCKNCTMDNLNNDVCCQICGEHKDSKILSRGHFASPFAQDEDPDEIQPSIKRLKDVDSLESAANSSTAIGFDERMLLHAEVEMKPHPHPERPDRLRAIAASLARAGIFPGRCHSIPAREITQEELMMVHSSEHIESVEVTSKLMSSYFTSDTYANEHSACAARLAAGLCADLASAVVSGRAKNGFALVRPPGHHAGVKDVMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEDGTFYPGTGGAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFAFQHVVLPIASEFAPDFTIISAGFDAARGDPLGGCDITPSGYAQMTHMLNALSGGKMLVILEGGYNLRSISSSATAVIKVLLGESPVRELENNFPTKSGLQTVFEVLDIQNNFWPSLKPIFKNVMSLWEMQCLGKKSKQRKKRRRILAPMWWRWSRRNFLFHMLNGHVRVKSK* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4425 663 MobiDBLite consensus disorder prediction 1 25 - -
Mal5g4425 663 Gene3D Histone deacetylase domain 254 632 IPR037138 -
Mal5g4425 663 PRINTS Histone deacetylase superfamily signature 384 407 IPR000286 -
Mal5g4425 663 PRINTS Histone deacetylase superfamily signature 505 515 IPR000286 -
Mal5g4425 663 PRINTS Histone deacetylase superfamily signature 417 432 IPR000286 -
Mal5g4425 663 PANTHER HISTONE DEACETYLASE-RELATED 124 662 - -
Mal5g4425 663 ProSitePatterns Zinc finger RanBP2-type signature. 194 213 IPR001876 -
Mal5g4425 663 MobiDBLite consensus disorder prediction 63 79 - -
Mal5g4425 663 SUPERFAMILY Arginase/deacetylase 258 601 IPR023696 -
Mal5g4425 663 PANTHER HISTONE DEACETYLASE 124 662 - -
Mal5g4425 663 MobiDBLite consensus disorder prediction 39 86 - -
Mal5g4425 663 MobiDBLite consensus disorder prediction 106 120 - -
Mal5g4425 663 MobiDBLite consensus disorder prediction 43 58 - -
Mal5g4425 663 MobiDBLite consensus disorder prediction 106 145 - -
Mal5g4425 663 Pfam Histone deacetylase domain 282 570 IPR023801 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4425 Mal-Chr5 115819590 115828909 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4425 - - mtr:MTR_4g111985 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4425 5 115819590 115828909 Mal5g4425 5 115819590 115828909 ECH