Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4383 ATGGCGATGGTTGTCACTGCCATTCTTGCTATCTTTCTCATGTGTTCTCCATCATCAATAGCTATATTACTGAACAAGCTTCAGCTACCACCACCATTGACAGGACCAGAGTCACTTGCATTTGATAGAAACGGTGGAGGACCTTATGTTACTTCTTCTGATGGAAGAATTTTTAAATATCTTGGTTCAAATGAAGGTTTCAAGGAATATGCTTACACTTCTCCTAATAGGAACAGGACAATCTGTGATGGGCTTGCTGACTTCTCAGTAGTCCAAGCAATATGTGGAAGACCTTTAGGATTGGGTTTCAATCATCAAACAGGAGATTTGTATGCAGCTGATGCTTATTTTGGACTTGTTAAGGTTGGTCCCAATGGTGGGAATGCAACCCAAGTTGGACCAACACAAGCCAATTCTACTAGGTTTGCTGATGGTTTGGATGTAGACCCAAACACTGGAATCGTTTATTTTACCATAGCTAGCACTATTAACCAGCTCAAAGATTTCCAGACAGTGGTAGCCAGTGGCAGTGGAGATAATTCAGGAAGCCTATTGCAATATGATCCAAGCACCAACCAAACAACAGTGTTGCTAAGAAACCTTACAATTCCATCTGGGGTGGCAGTAAGCAGTGATGGCTCATTTGTACTTGTTAGTGAATATCTAGCAAACAGAATTCAGAGAGTGTGGTTGAAAGGACCAAGAGCAAATTCATCAGAAATATTCATGCTACTTGCTGGAAGACCAGATAACATAAAGAGGAATTCAAGAGGCCAATTTTGGATTTCAGTTAATAGTTTTTTAGGGACACCAAGATCTCCAGGATGTTCTACTTTGCCTTCGGGTGTTAGAGTGACCGAGAATGGTATAGTTTTACAGATTGTGTCTCTTGTTGAAGAGTATGGTACTGAAGCAGCTAGTGAGGTTCAAGAGTACAATGGAACACTCTATGGTGGCTCCCTGCTTGCTTCTTATGCAACCATTTTTACTCCCTAG 996 0.4127 MAMVVTAILAIFLMCSPSSIAILLNKLQLPPPLTGPESLAFDRNGGGPYVTSSDGRIFKYLGSNEGFKEYAYTSPNRNRTICDGLADFSVVQAICGRPLGLGFNHQTGDLYAADAYFGLVKVGPNGGNATQVGPTQANSTRFADGLDVDPNTGIVYFTIASTINQLKDFQTVVASGSGDNSGSLLQYDPSTNQTTVLLRNLTIPSGVAVSSDGSFVLVSEYLANRIQRVWLKGPRANSSEIFMLLAGRPDNIKRNSRGQFWISVNSFLGTPRSPGCSTLPSGVRVTENGIVLQIVSLVEEYGTEAASEVQEYNGTLYGGSLLASYATIFTP* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4383 331 Pfam Strictosidine synthase-like, N-terminal 27 59 - -
Mal5g4383 331 PANTHER SMP-30/GLUCONOLACONASE/LRE-LIKE REGION PROTEIN 1 329 - -
Mal5g4383 331 Gene3D - 18 330 IPR011042 -
Mal5g4383 331 Pfam Strictosidine synthase 144 234 IPR018119 GO:0009058|GO:0016844
Mal5g4383 331 SUPERFAMILY Calcium-dependent phosphotriesterase 26 285 - -
Mal5g4383 331 PANTHER STRICTOSIDINE SYNTHASE-RELATED 1 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4383 Mal-Chr5 115243563 115244762 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4383 - K01757 mtr:MTR_4g112620 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4383 5 115243563 115244762 Mal5g4383 5 115243563 115244762 ECH