Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4375 ATGTCACTCACACGCTCCGCAATCCACCGCTTCCGTTACATCATCATCTACCACCACACTACAATATCACCTCCACCTCCAGTTACTCATGCCTTTCAATTCCAACGCCACCCCTCTTTTTCCTCTCACCCCATTCCCAAACCCTTCCATTTCCACTCTTCTTCTTCCTACTCCTCCTCATCTTCAAATTCTACTCTTAAACAAGAAGAATCTATCAGTGGCAATGACAAAGATTATCCCACTGGTGATTTTGATTTCAAGCCCCTTACCGGCTTCAACAAATTTCTCGTCAAGCTCAAGATGCTAATAGCATTCCCTTGGCAGCGTGTTCAACATGGCAGCGTCTTGAAAATCATTTTGCGAGGCCAGATAACCGATCAGTTGAACAGTAGATTCTCCTCGAAGAGATTATCTCTTCCCCAATTTTGCGATAATTTGTTCAAAGCAGCTTATGATCCTCGTATTTCTGGCGTCTATATTCAAATTGACAATTTAAATTGTGGTTGGGCTAAACTCGATGAAATTCGAAGGCAGATCTTAAATTTCAGAAAATCAGGAAAATTTGTTGTGGCTTATGTCCCTTCATGTCGAGAAAAAGAATATTACATTGCTTGTGCATGTGAAGAAATATATGCCCCTCCGAGTGCTTATTTTTCTTTGTTTGGATTGACTGTTCAAGCGGCATTTGTCAGAGGGGTTTTTGACAACCTTGGAATTGAACCACACGTTGAAAAATTTGGCAAATATAAAAGTGCAGGAGATCAACTAACCCGCAAAACCATGTCTGATGATCATCGTGAGATGCTGACTGCATTACTCGATAATATCTATTCAAATTGGCTGGATAAAGTATCTTTTGCTAGAGGAAAAGAAAGAGAAGATATTGAGAACTTCATAAATGAAGGTGTCTATCAAGTAGACAGACTGAAAGAAGAGGGTTTCATAACAAGCATACTCTATGATGACGAGGTTATCACTAGGTTGAAGGAGAGACTTCAGGTGAAAACGGACAAAAAACTGCCTATGATTGATTTCAGAAAATACTCTGGAGTTAGAAAATGGACTGTCGGAATATCAGGTGGAAAAGATTTGATAGCCGTCATCCGAGCCTCAGGGACCATCCGTCGTACTGAGAGTCCATTTAGTGCCCCTAGCAAAGGTGTTATTGGAGAGAAGTTCATTGAGAAGATCCGTAGGGTCAGAGAGTCGAAAAAATTCAAGGCTGCTATTATCCGAATTGACAGTCCAGGAGGTGATGCTCTTGCTTCTGATTTAATGTGGAGAGAAATCAGGCTTCTGGCTGCCAAAAAACCAGTCATTGCTTCAATGTCTGATGTGGCAGCAAGTGGAGGATACTACATGGCAATGGGAGCTGGAGCTATTGTTGCGGAAAGTCTTACCTTAACTGGTTCAATTGGAGTGTTCACAGGAAACTTTAAACTTGAGAAACTTTATGAGAAGATTGGCTTCAACAAAGAAATTATATCAAGGGGTAAATATGCCGAGCTCCTAGCCGCTGAACATCGTTCTTTTAGGCCACATGAAGCAGAGCTATTTGCCAAGTCTGCACAAAATTTTTATAAACAATTTCGAGATAAGGCAGCTTTTTCCAGATCAATGACTGTAGACAAGATGGAAGAGGTCGCACAGGGGAGAGTTTGGACCGGTAAAGACGCAGCATCTCATGGTTTGGTTGATGCTATTGGTGGGCTATCTCGTGCTATTGCTATAGCAAAATTGAAAGCTAATATACCTCAAGATAGACAGGTTACTGTTGTGGAACTCTCAAGACCCAGTCCTTCTCTACCCGAGATTTTAAGCGGTCTTGATAATTCTCTCGTTGGAGTGGACGAAACACTTAAGGAACTACTACAAGACTTGACATTTTCTGATGGAGTTCAAGCGCGAATGGATGGAATCATGTTTCAGAAATTGGAAGGAAATCCATCTGCGAGCCCCATTTTGGCATTGATGAAAGATTACCTCAGTTCTATGTAG 1998 0.4149 MSLTRSAIHRFRYIIIYHHTTISPPPPVTHAFQFQRHPSFSSHPIPKPFHFHSSSSYSSSSSNSTLKQEESISGNDKDYPTGDFDFKPLTGFNKFLVKLKMLIAFPWQRVQHGSVLKIILRGQITDQLNSRFSSKRLSLPQFCDNLFKAAYDPRISGVYIQIDNLNCGWAKLDEIRRQILNFRKSGKFVVAYVPSCREKEYYIACACEEIYAPPSAYFSLFGLTVQAAFVRGVFDNLGIEPHVEKFGKYKSAGDQLTRKTMSDDHREMLTALLDNIYSNWLDKVSFARGKEREDIENFINEGVYQVDRLKEEGFITSILYDDEVITRLKERLQVKTDKKLPMIDFRKYSGVRKWTVGISGGKDLIAVIRASGTIRRTESPFSAPSKGVIGEKFIEKIRRVRESKKFKAAIIRIDSPGGDALASDLMWREIRLLAAKKPVIASMSDVAASGGYYMAMGAGAIVAESLTLTGSIGVFTGNFKLEKLYEKIGFNKEIISRGKYAELLAAEHRSFRPHEAELFAKSAQNFYKQFRDKAAFSRSMTVDKMEEVAQGRVWTGKDAASHGLVDAIGGLSRAIAIAKLKANIPQDRQVTVVELSRPSPSLPEILSGLDNSLVGVDETLKELLQDLTFSDGVQARMDGIMFQKLEGNPSASPILALMKDYLSSM* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4375 665 SUPERFAMILY ClpP/crotonase 356 570 IPR029045 -
Mal5g4375 665 TIGRFAM SppA_dom: signal peptide peptidase SppA, 36K type 365 578 IPR004635 GO:0006508|GO:0008233
Mal5g4375 665 PIRSF Protease_4_SppA 59 665 IPR004634 GO:0006465|GO:0008233|GO:0016021
Mal5g4375 665 CDD S49_SppA_67K_type 116 330 - -
Mal5g4375 665 Gene3D - 360 506 - -
Mal5g4375 665 Gene3D - 507 634 - -
Mal5g4375 665 Gene3D - 255 350 - -
Mal5g4375 665 Gene3D - 113 253 - -
Mal5g4375 665 CDD S49_Sppa_N_C 365 579 IPR002142 GO:0006508|GO:0008233
Mal5g4375 665 SUPERFAMILY ClpP/crotonase 102 320 IPR029045 -
Mal5g4375 665 PANTHER PROTEASE 4 59 664 - -
Mal5g4375 665 MobiDBLite consensus disorder prediction 52 70 - -
Mal5g4375 665 MobiDBLite consensus disorder prediction 52 77 - -
Mal5g4375 665 Pfam Peptidase family S49 433 583 IPR002142 GO:0006508|GO:0008233
Mal5g4375 665 Pfam Peptidase family S49 182 334 IPR002142 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4375 Mal-Chr5 115162760 115170537 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4375 K04773 - gmx:100809623 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4375 5 115162760 115170537 Mal5g4375 5 115162760 115170537 ECH