Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4326 ATGGCAGAAACTCAAAGAACTTCATCAACCGTTCTCGATAGTTTAGGCGAAGAAATCGTTAGAATTATCACTCCCGTTTCAATCTGCATGTTCCTCGTTGTAATCTTAGTCTCAATTCTCAACACAAACGATTCCCCAACAATCTCCACCATAGCCAACATAGCATACGACGAAACAACCTCAGATTCTTCCTGGGACAAATTCCTCGGTGCACTGTTAAACTCTCTCTCCTTCGTCGTCGTTGTAACTTTCGCCACTTTCTTCTTAGTTCTTCTTTTCTATTTCCGATGTATCACGTTCTTGAAACTCTACATGGCTTTTTCTTCCTTTGTCGTATTAGGTTTTCTCGGAGGTGAAATTTCAATTTTTTTGATACAACATTTTAGTGTTCCGATTGATTTTATAACGTTTTTGGTTGTTTTGTGTAATTTTGCTGTTGTTGGTGTTTGTGCTGTTTTTATGTCGAAAATGGCTATTTTTGTTACACAAGGTTATTTGGTGGTTATTGGAATATTGGTTGCTTATTGGTTTACTATGTTGCCTGAATGGACAACATGGGCTATGCTTGTTGCTATGGCTTTGTATGATCTTGCTGCTGTTTTGTTGCCTGTTGGTCCTTTGAGGCTTTTGGTTGAACTTGCTATGTCAAGGGATGAAGAAATTCCGGCGTTGGTTTACGAGGCTAGGCCGGTGAGTAATGATAATATGGATCCTAGGGTTGTCGCGGCTCGGAGGAGGTTATGGAGAGAGAGGAGGATTGAGAGTTCTAATATGATGATAACTGAGAGTGGGAATTCTGTGTTGGGTAGTAGTGGACTCAACGTTGAAGAATCACGGTCTAATTCAGACGTGAATGCTGTTCTTAGTTCAAATTCAAATGTAAATACATCGGATGACGTGAATTTGTCTCCAGAAAATGCTTCGAATTTGAACTCTAGTAGCTCTACTGGAGCGTGTAATTTGGTAAGAGCTGAAGAGGGGCGATTGAGAGTTCGAGAAGTGGATTCAGATCTTGCCACACCCTTGATTGATCATGGTATGAATGTGCGGGTTCCTAGAGGAGAAGATGCTGCGTCGAATGAGAATTTGATGCTGGAGGGAATTGGATTGGCTTCGTCCGGGGCAATCAAGTTGGGTTTGGGCGATTTTATCTTCTATAGTGTTTTGGTTGGCAGAGCTGCAATGTATGATTTTATGACAGTGTATGCATGTTATCTTGCAATTATTGCTGGTCTCGGCGTAACTTTGATGCTTTTGGCTTTATATCAGAAAGCCTTGCCTGCTCTTCCTGTGTCGATAGCACTCGGTGTGTTGTTTTATTTCTTGACCAGATTATTACTTGAAGTATTTGTGGTACAATGTTCCTTGAATCTCTTGATGTTCTAA 1386 0.4084 MAETQRTSSTVLDSLGEEIVRIITPVSICMFLVVILVSILNTNDSPTISTIANIAYDETTSDSSWDKFLGALLNSLSFVVVVTFATFFLVLLFYFRCITFLKLYMAFSSFVVLGFLGGEISIFLIQHFSVPIDFITFLVVLCNFAVVGVCAVFMSKMAIFVTQGYLVVIGILVAYWFTMLPEWTTWAMLVAMALYDLAAVLLPVGPLRLLVELAMSRDEEIPALVYEARPVSNDNMDPRVVAARRRLWRERRIESSNMMITESGNSVLGSSGLNVEESRSNSDVNAVLSSNSNVNTSDDVNLSPENASNLNSSSSTGACNLVRAEEGRLRVREVDSDLATPLIDHGMNVRVPRGEDAASNENLMLEGIGLASSGAIKLGLGDFIFYSVLVGRAAMYDFMTVYACYLAIIAGLGVTLMLLALYQKALPALPVSIALGVLFYFLTRLLLEVFVVQCSLNLLMF* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4326 461 MobiDBLite consensus disorder prediction 270 315 - -
Mal5g4326 461 Pfam Presenilin 16 451 IPR001108 GO:0004190|GO:0016021|GO:0016485
Mal5g4326 461 PANTHER PRESENILIN 9 461 IPR001108 GO:0004190|GO:0016021|GO:0016485
Mal5g4326 461 Gene3D Presenilin 360 453 IPR042524 -
Mal5g4326 461 SMART psh_8 69 447 IPR006639 GO:0004190|GO:0016021
Mal5g4326 461 PANTHER PRESENILIN 9 461 - -
Mal5g4326 461 PRINTS Presenilin family signature 196 213 IPR001108 GO:0004190|GO:0016021|GO:0016485
Mal5g4326 461 PRINTS Presenilin family signature 179 186 IPR001108 GO:0004190|GO:0016021|GO:0016485
Mal5g4326 461 PRINTS Presenilin family signature 23 33 IPR001108 GO:0004190|GO:0016021|GO:0016485
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4326 Mal-Chr5 114455646 114457031 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4326 1 461 Miscellaneous Gene Families AT2G29900 58.405 4.56e-158 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4326 K04505 - gmx:100799643 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4326 5 114455646 114457031 Mal5g4326 5 114455646 114457031 ECH