Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4320 ATGAGAACAAAAGCGAAAACAAGTACTCAGCGGCTCGTTGGTTTACTATACGACGAGAAGATGTGTAAGCACTACGATCCCGACGACGATCATCATCCCGAAACTCCAAATCGCATTAGGGCTATTTGGGATAAACTCCAAACCACCGGCATTACTGACCGATGTGTGATTTTGGATGCTAAAGAAGCTGAAGATAAACATTTACTAGCAGTCCATTCCAAAAATCATGTGAATCAGATTAAGAATATCAGCTATGAAAGTTTTAATCCTAGTATTTACGCAGCGTCCAAACTTAATTCTATATATTTCAATGAAGGTTCAACTAAAGCTGCATATCTTGCTGCTGGCGGTGCTATAGAGGCTGCTAAAAGAGTGGCTAGCAAGGAATTGCATTCTGCTGTTGCTATTGTTAGGCCTCCAGGTCATCATTGCGAGCAAGATAAAGCTATGGGATTTTGTCTGTTCAACAATGTGGCAGTTGCTGCATCTTATCTCTTAGATAATAGTCCAGAATTTGGTGTAAAGAAAATTTTAATTGTTGACTGGGACGTTCATCATGGAAATGGTACTCAAAAAATGTTTTGGAATGATTCTCGAGTGTTGTTCTTCTCCGTTCACAGGCATGAATTTGGGAGATTTTATCCGGGTGGTGATAATGGCTTTTATAACATGATTGGAGAAGGAGATGGTGCTGGATACAATATAAATGTGCCATGGGAGAATGGGAGATGTGGTGATGCAGACTATTTAGCAGTGTGGGACCACATCTTGCTCCCTGTTGCCAAAGATTTTAATCCAGACATAATTATAGTTTCTGCTGGATTTGATGCTGCTGTTGGAGACCCTTTGGGTGGATGTTGCATCACACCATTTGGTTATTCCCTTCTGTTGAAAAAGTTGATGAATTTTGCTGAAGGTAGGATTGTACTGGTTCTAGAAGGAGGCTATAATCTTGACTCAATTGCAAAATCAATGCATGCTTGTGTGGAAGTTTTGCTTGAAGACAAGCCTCTTATGGGGTCTTCAGAGGCCTGTCCATTTGAGTCTACATGGCGTGTGATCAAAGCGGTCCGCGAGGAGTTAAGTCCCTTTTGGCCCACACTTGCCTGTGAATTACCACAAAATATAAATGGTCTAGTGGCACCACCTCTGCATACTCTTTCATCAAGCTCTGAATCTGAGACTGAGGATGACAAAGCTCCACCGAAATTAGAAAATGTTGCAGAGCTGCTTGAGGACGTCATCAAACCACTTTCCGAGCTCAAAGTTGATGCAGATGAAGAGCCTGATGCTTGTTCCTGGCGATCCAAATTGTCAAATGTTTACTTATGGTATGCTTCTTATGGCTCAAATATGTGGAGACCAAGATTTGATTGCTACATAGCTGGTGGACAGGTGGAAGGTATGCAGAAGTCGTGCTCTGGTTCAATGAACAAAACTCTTCCAGATGAGATCTTTTGGAAAACTTTCCCTTGTCATATATTTTTTGGTCGTGATTCCTCACATTCATGGGGTCCTGGAGGTGTTGCGTTTCTTAATCCTGAGAAAAATTCTCAGCACAAGTCCTACATGTGCATGTACAAAATTTCCCTAGAGCAGTTCAATGATGTTTTATTTCAAGAAAATGGTCTAAGCCTTGATGTAGACTCTTCTTTATTTGATATGACTACTCTAAATGCCATCTCCAACAAGGAGTTCAGTTCTCAGGAGGTTCTCAAAGATGGTTGGTATGGTAATGCTGTCTACTTAGGAAAGGAGCAAGACATTCCCATAATTACTATGACGTGTTCGCTTCTTGATATTGAGCGCTTCAAATCTGGGAAGCTACCATTGTGTGCGCCTAATAAATCGTACGCCAATACCTTGATAAGAGGGTTGGTAGAGGGAGAGCAGCTCTCAGAGGCTGAGGCCATTGCTTACATAGATGCTGCTGCTAAATCGTTATGA 1947 0.4165 MRTKAKTSTQRLVGLLYDEKMCKHYDPDDDHHPETPNRIRAIWDKLQTTGITDRCVILDAKEAEDKHLLAVHSKNHVNQIKNISYESFNPSIYAASKLNSIYFNEGSTKAAYLAAGGAIEAAKRVASKELHSAVAIVRPPGHHCEQDKAMGFCLFNNVAVAASYLLDNSPEFGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHEFGRFYPGGDNGFYNMIGEGDGAGYNINVPWENGRCGDADYLAVWDHILLPVAKDFNPDIIIVSAGFDAAVGDPLGGCCITPFGYSLLLKKLMNFAEGRIVLVLEGGYNLDSIAKSMHACVEVLLEDKPLMGSSEACPFESTWRVIKAVREELSPFWPTLACELPQNINGLVAPPLHTLSSSSESETEDDKAPPKLENVAELLEDVIKPLSELKVDADEEPDACSWRSKLSNVYLWYASYGSNMWRPRFDCYIAGGQVEGMQKSCSGSMNKTLPDEIFWKTFPCHIFFGRDSSHSWGPGGVAFLNPEKNSQHKSYMCMYKISLEQFNDVLFQENGLSLDVDSSLFDMTTLNAISNKEFSSQEVLKDGWYGNAVYLGKEQDIPIITMTCSLLDIERFKSGKLPLCAPNKSYANTLIRGLVEGEQLSEAEAIAYIDAAAKSL* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4320 648 PRINTS Histone deacetylase superfamily signature 266 276 IPR000286 -
Mal5g4320 648 PRINTS Histone deacetylase superfamily signature 139 162 IPR000286 -
Mal5g4320 648 Pfam Histone deacetylase domain 32 331 IPR023801 -
Mal5g4320 648 PANTHER HISTONE DEACETYLASE 9 601 - -
Mal5g4320 648 Gene3D - 432 647 - -
Mal5g4320 648 PANTHER BNAA09G05590D PROTEIN 9 601 - -
Mal5g4320 648 Gene3D Histone deacetylase domain 5 377 IPR037138 -
Mal5g4320 648 SUPERFAMILY Arginase/deacetylase 13 363 IPR023696 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4320 Mal-Chr5 114401684 114422064 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4320 K11406 - gmx:100788831 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4320 5 114401684 114422064 Mal5g4320 5 114401684 114422064 ECH