Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4306 ATGTTCCATTCAAAGAATTCTCCTTTGAAAGTTGGGAAACCCCACTCCGTAGGTCCTGTCAATGATGTTAAATCCTGGTCCAATCCGTTTGATTCTGACAATGAGGAAAAGGATAGCAGAAAGATGAGTTCGTCTAAGAAGACTTCTTCAGAACGAGCACTAGTTACCTTAGAAGTCAATACCAACCCATTTGATGATGTTGATGACACTGTCACTAAGAAATCGCCATCATCAACGTATGCTCATCAATCAGCAGACCGGAACAGGTATAAGAATCATTTTCGTGATTCTGGCGGATTAGAGAATCAATCCGTACAGGAGTTGGAGAATTATGCTGTTTACAAGGCTGAGGAGACTACGAAATCGGTCCACAATTGTTTGAAGATAGCAGAGAACATAAGAGAGGATGCTACCAAGACATTGGTCACCCTTCATCACCAGGGTGAGCAAATTACTAGGAGTCACCAAGTTGCCACTGACATCGATCGAGATTTAAGTCGGGGAGAAAAGCTTTTGGGAAGTCTTGGCGGCCTCTTCTCCAAAACATGGAAACCAAAGAAGACACGTACAATAACAGGCCCTGTTATTTTTGGAGATGATGCGGTCAGAAGAAAGGGAAACCACTTGGAACAGAGAGAGAAATTGGGATTGACTTCTGCATCCAAAGGGCAGTCCAGGCTGCGGACTCCACCTCAGGAACCAACAGCTGCACTTGCAAAAGTCGAGTTTGAAAAAGAGAAGCAAGATGATGCACTGTCAAATTTAAGTGATCTATTGGGAGAGCTTAAAGACATGGCTGTTGACATGGGATCAGAATTTGAGAGGCATAACAAAGCCTTGAGTCATTTAGACAATGATGTGGATGAGCTGAATTTCCGAGTGAAAGGTGCTAATCAACGTGCCCGTCGTTTAATTGGAAAATAA 924 0.4318 MFHSKNSPLKVGKPHSVGPVNDVKSWSNPFDSDNEEKDSRKMSSSKKTSSERALVTLEVNTNPFDDVDDTVTKKSPSSTYAHQSADRNRYKNHFRDSGGLENQSVQELENYAVYKAEETTKSVHNCLKIAENIREDATKTLVTLHHQGEQITRSHQVATDIDRDLSRGEKLLGSLGGLFSKTWKPKKTRTITGPVIFGDDAVRRKGNHLEQREKLGLTSASKGQSRLRTPPQEPTAALAKVEFEKEKQDDALSNLSDLLGELKDMAVDMGSEFERHNKALSHLDNDVDELNFRVKGANQRARRLIGK* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4306 307 MobiDBLite consensus disorder prediction 29 47 - -
Mal5g4306 307 SUPERFAMILY SNARE fusion complex 103 173 - -
Mal5g4306 307 CDD SNARE_Qc 245 303 - -
Mal5g4306 307 Gene3D - 99 176 - -
Mal5g4306 307 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 307 - -
Mal5g4306 307 SUPERFAMILY SNARE fusion complex 244 304 - -
Mal5g4306 307 MobiDBLite consensus disorder prediction 1 102 - -
Mal5g4306 307 SMART tSNARE_6 237 304 IPR000727 -
Mal5g4306 307 SMART tSNARE_6 108 175 IPR000727 -
Mal5g4306 307 CDD SNARE_SNAP25N_23N_29N_SEC9N 110 174 IPR044766 GO:0005484|GO:0031201
Mal5g4306 307 Gene3D - 239 306 - -
Mal5g4306 307 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 242 304 IPR000727 -
Mal5g4306 307 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 1 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4306 Mal-Chr5 114151004 114152831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4306 K18211 - gmx:100809874 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4306 5 114151004 114152831 Mal5g4306 5 114151004 114152831 ECH