Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4242 ATGGTTGGAGGAGACAGAACAAAGAAGCAAAAAGTCACCGAAAATCCCGAAGAAGTTGATGCTGAACTCATTCTCTCCATCGAGAAATTGCAAGAGATCCAAGACGACCTCGAAAAGATTAATGATGAAGCGAGTGATAAGGTTCTCGAAATTGAGCAGAAGTATAATGAGATTAGGAAACCGGTTTACGATAAGCGAAATGAGATTATCAAATCCATTCCTGACTTCTGGTTGAATGCTTTTTTGAGTCATCCTACCCTCTGTGAACTTCTGAATGAGGAAGATCAAAAGATATTCAAGTATTTGAGTTCTCTTGAGGTTGAGGATAATAAGGATGTCAAATCTGGATACACAATCACCCTTAATTTCAATCCAAATCCCTATTTTGAGGATTCAAAACTTTCAAAGACTTTTACCTTCCTTGAAGAAGGAACAACAGAGATCACTGCTACCCCCATAAAATGGAAAGAGGGCATGGGAATACCCAATGGTGTTAATCATGAGAAGAAAGGGAACAAAAGGGCTCCTGTTGATGTCAGTTTCCTTAGTTGGTTTTGTGACTGTGAGCAGAAAGATGATATGGCTGACATTCATGACGAGGTTGCAGAATTAATCAAGGATGATTTATGGTCAAATCCACTCATTTATTTCAACAATGAGGAGCCTGATGAAGAGGATGTTGATGATGAAGCTGATGATGAGGAAAAAGATGAGGACGACTCTGAAGAAGAGGATGACGATGAGGGTGACAATGAGGAAGGCAATTGA 768 0.3958 MVGGDRTKKQKVTENPEEVDAELILSIEKLQEIQDDLEKINDEASDKVLEIEQKYNEIRKPVYDKRNEIIKSIPDFWLNAFLSHPTLCELLNEEDQKIFKYLSSLEVEDNKDVKSGYTITLNFNPNPYFEDSKLSKTFTFLEEGTTEITATPIKWKEGMGIPNGVNHEKKGNKRAPVDVSFLSWFCDCEQKDDMADIHDEVAELIKDDLWSNPLIYFNNEEPDEEDVDDEADDEEKDEDDSEEEDDDEGDNEEGN* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4242 255 MobiDBLite consensus disorder prediction 216 255 - -
Mal5g4242 255 Coils Coil 224 244 - -
Mal5g4242 255 Coils Coil 23 54 - -
Mal5g4242 255 Gene3D - 4 73 - -
Mal5g4242 255 SUPERFAMILY NAP-like 9 218 IPR037231 -
Mal5g4242 255 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 5 248 IPR002164 GO:0005634|GO:0006334
Mal5g4242 255 MobiDBLite consensus disorder prediction 219 255 - -
Mal5g4242 255 Pfam Nucleosome assembly protein (NAP) 71 219 IPR002164 GO:0005634|GO:0006334
Mal5g4242 255 Gene3D Nucleosome assembly protein 74 221 - -
Mal5g4242 255 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 5 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4242 Mal-Chr5 113377685 113382999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4242 K11290 - gmx:100810307 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4242 5 113377685 113382999 Mal2g4876 2 110567575 110573441 ECH
Mal5g4242 5 113377685 113382999 Mal5g4242 5 113377685 113382999 ECH