Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4234 ATGTCGAGAAAGTCAAGTGAAATTTTAGACGATCCTAAGGAAGGGGAAAAACAGAAGAATCTCGAAAATCATGCAGATGACTCGCGTTTGCTTATTTCCCATCTTGATCGTGATGCATCAATCCATTGTCTCCTTCGATTGTCAAGGTCAGATTATGGATCAATTGCTGCATTGAACCGAAGTTTTCGATCACTCATTACGACTGGAGAATTGTACCAACTTAGGCGGAAAATGGGCATAGTTGAACATTGGGTTTACTTTTCCTGTGATGTCCTTAAATGGGAGGCCTTTGATCCAAATCGTGATCGGTTGATACAATTGCCTAAAATGAGTTCGAATATATGTTTTATGCTTTCAGACAAGGAGTCACTAGCTGTTGGTACAGAGCTTCTTGTTTTTGGAAGGGAAATAACGGGCCCTGCCATCTATAAATATAGCATTCTAACAAATTCATGGTTGAAGGGAATGAATATGAATACTCCTAGATGTTTGTTTGGTTCTGCGAGCCTCGGAGAAATTGCAATATTAGCTGGTGGTTGTGATCAACATGGCAACATCTTGAGCTCTTCTGAGCTTTATAACTCAGATACGGGTACATGGGAGATTCTCCCAAACATGAACACACCAAGGAGAATGTGTTCCGCAGTGTTTATGGATGGAAAATTTTATGTCCTTGGTGGGGTTGGAGTTGACAAAACAACACAACTAACTTGTGGTGAGGAGTTTGATTTGAAGACAAGAAAATGGCGCAAAATACCCAACATGTGTCCTCCACGTAATGGAGGAGACGGTGCAAATGAGACACCGGTCAGTGGTGAGGCACCTCCTCTAATTGCAGTTGTAAACAATGTATTGTATGCTGCTGATTATGCACAACAAGAAGTAAAAAGATATGTTAAAGACAAAAACTCATGGATCACCATTGGAAGCCTTCCGGAGCGAGTAACCTCGTTAAATGGGTGGGGAATGGCCTTTAGATCATGTGGAGATAAGCTAGTTGTCATTGGAGGTCCTAGTCTTCATGGTGGAATGGTAACAGAAGTCAATGCATGGGTAGCAGATGAAGACGCACCACAATGGAATTTGCTTGCAATAATCCAATCAGGGAGATTTGTGTATAATTGTGCTGTGATGGGTTGTTGA 1143 0.4156 MSRKSSEILDDPKEGEKQKNLENHADDSRLLISHLDRDASIHCLLRLSRSDYGSIAALNRSFRSLITTGELYQLRRKMGIVEHWVYFSCDVLKWEAFDPNRDRLIQLPKMSSNICFMLSDKESLAVGTELLVFGREITGPAIYKYSILTNSWLKGMNMNTPRCLFGSASLGEIAILAGGCDQHGNILSSSELYNSDTGTWEILPNMNTPRRMCSAVFMDGKFYVLGGVGVDKTTQLTCGEEFDLKTRKWRKIPNMCPPRNGGDGANETPVSGEAPPLIAVVNNVLYAADYAQQEVKRYVKDKNSWITIGSLPERVTSLNGWGMAFRSCGDKLVVIGGPSLHGGMVTEVNAWVADEDAPQWNLLAIIQSGRFVYNCAVMGC* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4234 380 Pfam Kelch motif 209 255 IPR006652 GO:0005515
Mal5g4234 380 Pfam Kelch motif 161 207 IPR006652 GO:0005515
Mal5g4234 380 MobiDBLite consensus disorder prediction 1 22 - -
Mal5g4234 380 SUPERFAMILY Kelch motif 91 377 IPR015915 GO:0005515
Mal5g4234 380 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 14 380 - -
Mal5g4234 380 Gene3D - 72 379 IPR015915 GO:0005515
Mal5g4234 380 SMART kelc_smart 129 172 IPR006652 GO:0005515
Mal5g4234 380 SMART kelc_smart 221 268 IPR006652 GO:0005515
Mal5g4234 380 SMART kelc_smart 173 220 IPR006652 GO:0005515
Mal5g4234 380 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 14 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4234 Mal-Chr5 113223915 113225057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4234 32 263 EF-hand Containing Proteins AT4G39560 28.017 1.09e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4234 - - cam:101513734 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4234 5 113223915 113225057 Mal5g4234 5 113223915 113225057 ECH