LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal5g4217	ATGGATCGTCAATGGCGTCCAAATCCCAATCTCAATCCAAGACCAATCCAATACCAAAACAATCTCTGCCCCAATTGCTTCATCCAACACTTCCCCTTTTGCCCTCCCCCTTCCCCTAATTGGCCGCCACCACCCAACCCTAACGTCAACAATTACGACGCCGATTTTGATAGAACCTTCAAGAAACCAAGAATCGACGACAACGCCGACGAACGAAGATTAAAGCTTATTCGTGATCACGGTCTCAATCCACCTCAACCTCAATTTCAACACCCCAACCACCACGCTTACGTCACACCACCACCACTACCGCCGCCACAACATCACCGTGACGCATTTCCTCCTCCTCCTCCACCACCACCACCACCAATTTATCATCCTCAACAACACCACAACGAGATCAATCCACCTTACCACGATCCCAATTTTCACCATTTTCAACCTCAACAAGTCAATAATCATAATCATAATTTCAATGCAAGAGAATTTCATCATCCATATCCCTATCCAAATCCTTACCCTAACAACGGTTTTTCTGATAATACCGGTCAAATGGAAGCTTCTAGACTCTTCAGGCCTCCTCTTCCTACTTCTCCGCCACCACCTCTTCCAATGGATCCACCCATGTATTTTTCTCCACCTAAGAAACCACCTTCACTTTTTCCTGTTACTTCTTCAGTTTCTCACGAACCTAACCCTTATTTTCACACTAGTAAACCACAATTTTCCACTGCTTTTCCTATCGAGGAACCATCAAAACAGTACTTGGGAGATGCCCAACCTTTTTCGTTAAATCAATTGGCTGCTGAGAAGCCTAAGTTTGTTGATGCTTCTCAATTATTCCGGAATCCATTTCGAACTTCACGGCCTGATCATTTTGTCATCATACTTCGTGGTTTTCCAGGTAGTGGTAAGACTTACTTGGCAAAGATGTTGCGTGATCTAGAGGTTGAAAATGGTGGTGATGCGCCACGAATTCATTCTATGGATGATTATTTTATGACCGAGGTTGAAAAGGTTGAGGATAGTGATGGATCAAAATCTTCAAGTTCAGGAAGAAACAAGAGGTCTGTAACAAAAAAGGTCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCTTATCGGTCAAGCATGTTGAAAGCATTCAAGAAAACTGTTGAGGAGGGCGTTTTTACCTTTATTATAGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAACTGCAAAGAGATCGGGCTACGAAGTTTACATTTTAGAAGCTACTTACAAGGACCCAGTGGGTTGTGCTGCAAGGAATGTCCATGGATTTACACAACAAGACATAGAAAAGATGGCTGAGCAATGGGAAGAAGCTCCATCCTTGTATCTGCAGCTTGATATGAAGTCACTATTTCATGGAGATGATCTAAAAGAAAACAGAATACAGGAGGTTGACATGGATATGGACGATGATCTTGATGATGCTTTAGTTGCAGCGCAAGCAAGAGAAGCTGACACAGCTGTCGACCATCCTGTCAAGGATGATGAAGGCTCCATAAAGGATGGGAAGAGATGGGATGCTGAAGAGGAACATCCAACGGAAGTCAGAGAACTTGGTAAAAGCAAATGGTCAGACGATTTTGGTGAAGATGACATCGACCAAACTGAAGGTATGAAGGGCAATATTAATGCTCTGTCTGGGTTAATTCATCAATATGGCAAGGAACGAAAATCTGTACATTGGGGTGATCAGGTTGGCAAAACAGGATTCTCAATAGGCACTGCAAGGAAGGTAACCACTTTGTCTTTAGTGATTGGACCTGGTGCTGGATACAACCTGAAATCGAATCCGTTACCTGAAGAGGAAACTCCAACCCGAAATTATGTGGAACCAAAGAAGCGTAATACATTTCAAGAACGAATCCGGGCTGAACGTGAATCATTCAAAGCTGTCTTTGATGGGAGACGTCCACGGATTGGACTTAATGTAGAGGAGGACTGA	1998	0.4359	MDRQWRPNPNLNPRPIQYQNNLCPNCFIQHFPFCPPPSPNWPPPPNPNVNNYDADFDRTFKKPRIDDNADERRLKLIRDHGLNPPQPQFQHPNHHAYVTPPPLPPPQHHRDAFPPPPPPPPPPIYHPQQHHNEINPPYHDPNFHHFQPQQVNNHNHNFNAREFHHPYPYPNPYPNNGFSDNTGQMEASRLFRPPLPTSPPPPLPMDPPMYFSPPKKPPSLFPVTSSVSHEPNPYFHTSKPQFSTAFPIEEPSKQYLGDAQPFSLNQLAAEKPKFVDASQLFRNPFRTSRPDHFVIILRGFPGSGKTYLAKMLRDLEVENGGDAPRIHSMDDYFMTEVEKVEDSDGSKSSSSGRNKRSVTKKVMEYCYEPEMEEAYRSSMLKAFKKTVEEGVFTFIIVDDRNLRVADFAQFWATAKRSGYEVYILEATYKDPVGCAARNVHGFTQQDIEKMAEQWEEAPSLYLQLDMKSLFHGDDLKENRIQEVDMDMDDDLDDALVAAQAREADTAVDHPVKDDEGSIKDGKRWDAEEEHPTEVRELGKSKWSDDFGEDDIDQTEGMKGNINALSGLIHQYGKERKSVHWGDQVGKTGFSIGTARKVTTLSLVIGPGAGYNLKSNPLPEEETPTRNYVEPKKRNTFQERIRAERESFKAVFDGRRPRIGLNVEED*	666

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal5g4217	665	MobiDBLite	consensus disorder prediction	97	127	-	-
	Mal5g4217	665	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	292	464	IPR027417	-
	Mal5g4217	665	PRINTS	Proline rich extensin signature	119	136	-	-
	Mal5g4217	665	PRINTS	Proline rich extensin signature	80	101	-	-
	Mal5g4217	665	PRINTS	Proline rich extensin signature	36	48	-	-
	Mal5g4217	665	PRINTS	Proline rich extensin signature	102	118	-	-
	Mal5g4217	665	PRINTS	Proline rich extensin signature	197	222	-	-
	Mal5g4217	665	MobiDBLite	consensus disorder prediction	79	184	-	-
	Mal5g4217	665	Gene3D	-	293	459	IPR027417	-
	Mal5g4217	665	MobiDBLite	consensus disorder prediction	503	531	-	-
	Mal5g4217	665	PANTHER	YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP	197	652	IPR026314	GO:0005634
	Mal5g4217	665	MobiDBLite	consensus disorder prediction	505	531	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal5g4217	K17602		-	gmx:100775851	763.066

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal5g4217	5	113019371	113027947	Mal5g4217	5	113019371	113027947	ECH