Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4181 ATGTTCTCCCTCAAAATGACAGAAATGTGGACAACAATGGGATCAACCTTAGCTAGCTTCATGTTCATTTGGGCTATCATAAGACAATATTGTCCATACCAACTTCTACGTTTCTTTGAAAAATACAGTCACAGAATCATGGACTATTTCTATCCTTACATAAGAATCTCATTCCATGAATTCTTAGGTGACAGACTCAAAAGAAGTGATGCTTATGGAGCTGTTGAAGCTTATCTCAGTGCCAACACATCAAAGAGTGCAAAAAGACTCAAAGCTGAGATTGGTAAAGATAGCACCAACTTGGTTTTAACAATGGATGAATATGAAAGAGTGACAGATGATTATAAAGGTGTGAAAGTTTATTGGGTTTGTAGCAAAGTTATGTCACAATCAAGATCCATGCCTTATTATCAAGAACAAGAGAAGAGATTCTACAAACTCACTTTTCATAAAAAGTATAGAGATACAATAACTGGTTCATATTTGGATCATGTGATGAAAGAAGGGAAAGAGATTCGTTTGAGGAACAGACAGAGGAAATTGTATACAAATAGTCCTGGTTACAAATGGCCAAGTTATAAGCAAACTATGTGGAGTCACATTGTTTTTGAACACCCTGCAACATTTGAAACAATGGCTATGGAGCCAGAGAAAAAGAAAGAGATTATTGAAGATTTGGTTACTTTTAGCAAAAGTAAGGATTTTTATGCTAGGATTGGGAAAGCTTGGAAAAGGGGTTATTTACTTTTTGGTCCTCCAGGTACTGGTAAATCAACAATGATTGCTGCTATGGCTAATTTGTTGGGCTATGATGTTTATGATTTGGAGTTAACAGCAGTGAAGGATAACACTGAGTTGAGGAAGCTTTTGATTGAGACTACAAGTAAGTCAATTATTGTTATTGAAGACATTGATTGTTCACTTGATCTTACAGGTCAAAGGAAGAAAAAAGGTGAAAGTAAGTTTTTTTCTGATGATGAGAATGAAAACAAGGCTAGTTTTGATGCTGTGAGGAAGGAGGTGAAGGAAGAAGGAAGTGGAGGTGGGAATAGCAAAGTGACACTTTCAGGGCTATTGAATTTCATAGATGGTATATGGTCAGCTTGTGGAGGTGAAAGGTTGATTGTTTTCACAACAAATTATGTGGAGAAGCTTGATCCTGCACTTATAAGGAGGGGTAGAATGGACAAACATATTGAACTTTCTTATTGTAGTTTTAATGGTTTTAAAGTGCTTGCTAATAATTACTTAAGGGTTGAGAATCATGCATTGTTTGAGAGTATTGAGAAGCTAATTGGTGAAGTGAAGATTACACCTGCTGATGTTGCTGAGAATCTTATGCCTAAGTCTCCAATGGATGATGCTGATAAATGTCTTTCAAATTTGATTGAAGCTCTTGCTGATAAAAAAGTTGAGGAGGTGAGAAAGAGTAGTGGTTTAATTAAGGAACAAGATGAGGAAGTGGAACATATTAGTCCTATTAAGGAAAATGGTGAGTTTGTTGATGATGAGAAAGATGATGATCAAGCAATGAAGCAAATTCAGAGGTAG 1551 0.3598 MFSLKMTEMWTTMGSTLASFMFIWAIIRQYCPYQLLRFFEKYSHRIMDYFYPYIRISFHEFLGDRLKRSDAYGAVEAYLSANTSKSAKRLKAEIGKDSTNLVLTMDEYERVTDDYKGVKVYWVCSKVMSQSRSMPYYQEQEKRFYKLTFHKKYRDTITGSYLDHVMKEGKEIRLRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFETMAMEPEKKKEIIEDLVTFSKSKDFYARIGKAWKRGYLLFGPPGTGKSTMIAAMANLLGYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGESKFFSDDENENKASFDAVRKEVKEEGSGGGNSKVTLSGLLNFIDGIWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCSFNGFKVLANNYLRVENHALFESIEKLIGEVKITPADVAENLMPKSPMDDADKCLSNLIEALADKKVEEVRKSSGLIKEQDEEVEHISPIKENGEFVDDEKDDDQAMKQIQR* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4181 516 Pfam ATPase family associated with various cellular activities (AAA) 248 402 IPR003959 GO:0005524|GO:0016887
Mal5g4181 516 Pfam Domain associated at C-terminal with AAA 32 124 IPR025753 -
Mal5g4181 516 CDD AAA 244 403 - -
Mal5g4181 516 MobiDBLite consensus disorder prediction 477 516 - -
Mal5g4181 516 PANTHER ATP BINDING PROTEIN 7 487 - -
Mal5g4181 516 Gene3D - 399 464 - -
Mal5g4181 516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 450 IPR027417 -
Mal5g4181 516 SMART AAA_5 243 405 IPR003593 -
Mal5g4181 516 ProSitePatterns AAA-protein family signature. 373 392 IPR003960 GO:0005524|GO:0016887
Mal5g4181 516 Gene3D - 203 398 IPR027417 -
Mal5g4181 516 PANTHER BCS1 AAA-TYPE ATPASE 7 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4181 Mal-Chr5 112299655 112301205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4181 208 401 Miscellaneous Gene Families AT5G58870 29.208 2.90e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4181 - - gmx:100798981 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4181 5 112299655 112301205 Mal5g4181 5 112299655 112301205 ECH