Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4178 ATGGCACACCGTTCTTCCCGCCGGCGAAACACGGCACCACCGGAGCCAAATCCACCTCCTGCTCCGGCGAAGGAAAAAAAACCAACCACCTTAAAACCCACCATCTTCTCATCATCACCTTCACCTTCTCACTACCCAAGACCAAACCAAGATTTGATTCAAGCAACTAAATCTTCTTTTTTAGTTAAACCTTTTCAAAGCCTTAACTTAGGTAGCAAAAAAACCAAACAACATTCTCAAACCAAACATGTTGTTGACACACGTTTGCAAGGTAAATATATGACAACCTCAGCTATATTTGATTCCCCAAAATCCAACAACACCCACCAAACAAAAATCACAGTACTAACACCAAATCATGAAAAAGATAGTGTTTTTTTGCATTCTAAGAGGACCCTTAAAGAGAAACCTCAAAAACTTCAAGGGTTGTTGAAGAATGAGAATAAGGTGGTTGATGATGTTAAGGTTGAAAAGTCAAGGAAAGTAACTGTTGTGGAAGAAGGTGATGTTGTTAAAGAAAGAATTTCTGTTTCTATGGGTCAAAATGGTGGTGGTAGAAGAAAATCGTTATGTGGGTCAATGATTGATTTAGGTGATTTCTTTGCAATTAATGGGGCGAAAATGGTTTCAGCTGATATGCCACCGTTTATGCAGATCCATGCTGTTGATTGTGCTAGAAAAGCTTTTGATAGTATGGAGAAGTTCACTTCCAAAACCCTAGCATCATCCCTCAAAAAGGAATTTGATGGGGTGTATGGGCCAGCATGGCACTGTATTGTGGGGACTAGTTTTGGATCATTTGTGACCCATTCTGTTGGTGGATTTCTATACTTCTCCATGGATCAAAAATTGTACATCCTTATATTTAAGACTGCTGTACAAAAAGCAGATTAA 894 0.3926 MAHRSSRRRNTAPPEPNPPPAPAKEKKPTTLKPTIFSSSPSPSHYPRPNQDLIQATKSSFLVKPFQSLNLGSKKTKQHSQTKHVVDTRLQGKYMTTSAIFDSPKSNNTHQTKITVLTPNHEKDSVFLHSKRTLKEKPQKLQGLLKNENKVVDDVKVEKSRKVTVVEEGDVVKERISVSMGQNGGGRRKSLCGSMIDLGDFFAINGAKMVSADMPPFMQIHAVDCARKAFDSMEKFTSKTLASSLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSMDQKLYILIFKTAVQKAD* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4178 297 Pfam Dynein light chain type 1 207 291 IPR001372 GO:0007017|GO:0030286
Mal5g4178 297 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 202 292 IPR037177 GO:0007017|GO:0030286
Mal5g4178 297 MobiDBLite consensus disorder prediction 31 50 - -
Mal5g4178 297 SUPERFAMILY DLC 204 291 IPR037177 GO:0007017|GO:0030286
Mal5g4178 297 SMART Dynein_light_2 201 291 IPR001372 GO:0007017|GO:0030286
Mal5g4178 297 PANTHER INTRASTRAND CROSS-LINK RECOGNITION PROTEIN-LIKE 1 297 - -
Mal5g4178 297 MobiDBLite consensus disorder prediction 12 26 - -
Mal5g4178 297 MobiDBLite consensus disorder prediction 1 50 - -
Mal5g4178 297 PANTHER DYNEIN LIGHT CHAIN 1 297 IPR001372 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4178 Mal-Chr5 112250040 112251439 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4178 - - gmx:100806149 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4178 5 112250040 112251439 Mal5g4178 5 112250040 112251439 ECH