Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4174 ATGGCGACTAGATTGTTTATTCGTTTTGTTGAGAGGTATATAGGAAAGTTCCCACACTTTGTGTTGTGCATGATGCTTGAGTGGGTGCTGATAATTTCTCTCTTCATTGATGGGCTTCTAGCATTTTTCATCACTGAGTTTGCAAGGTTCTTTGATTTGGAAATTCCATGTTGGCTCTGCGCAAAGATGAATCATTTTCTTACTCACAAGACTCCTAATTTTTATTACAACAGTTCCATGTGTGAGTCTCACAAGAAAGACGTTTCGTCTTTGGCGTTTTGTTACAATCACAAGAAGCTTTCTGATACAAGGAAAATGTGTGAAGGGTGTTTGCTTTCATTTGCAACGCAAAAGGAATCAGACTGTGATACCTATAAGTCTCTTGTAGGGGTTCTGAGTAAGAATATGGAGTTCTTTGTTGAAGATGGTGGAAACATACAATTGAGTTTGAAGGATGAAAGGGTTACACAGGTTGATATCAATGGTACTCAGAGGTGTTCATGTTGTGGAGCACCGTTGAAACCCAAGTCTTCCATATCTAAAGGAAACAATTCAGGTTCAATTTTACAAGCTCCAACCGCTTCGCCACGAGCTCATCCATTCATTGCTTCAAAATGCGAGGAATATCGTGGTACGGAATCGCCTCGAATCCTGAATGCAAAAAAAGATTATGAGCTTCCACGGAATGAGGATGACAACAACTTGAAAAATCAGAATATTGAATTAAAGGAAGTAAATAAAGGCGGCTCTTGGCCTATATTGTTAGGATCCGACGATATAACCATAGAATCCCCCAAAACCCCATCTTTTCCATGGGGCAACAGGTTCTTTGGAGCCCCGCTTACAGATTCTCCAAACAACAGTCCAAAATGGTCTTCTATATCTTCTGTATCGGGCAGGAAATCACCATTAGAAAAGATGGAATTTGCATCTGACTCTGTTGAGGGGAATTGTCAAGATGAAGAAGATGGTGCCGTGTTAAATAATTTAAAGAGGCAAGTTCGTTTGGATCGGAAGTCGCTCATGGCTTTGTACATGGAGCTGGATGAAGAGAGAAGTGCTTCAGCTGTTGCTGCCAACAATGCTATGGCCATGATCACCCGCTTGCAGGAAGAGAAGGCAGCTATGCAGATGGATGCTTCACAGTATCAAAGAATGATGGAGGAGCAGATAGAGTATGATGAAGAAGTCCTGCAAGAAACTAATGACCTGCTTGTCAAACTAGAGGAAGAAGTCAAAACTTTAGATACCGAATTGGAAATTTACAGAGAAAAATATGGATGTTTAACTGAAGATGATGTTAAGGCTCATGGTGGCAATAGCTTCCCAACCAGGTCCACTGAAGGTGAGGATGGTGTAGAAAATGACTTTGATCTTCATCAACCTGGTTCGTCAAAGGCGGAAAATGGAGGGGGAAAGTTCAAGGAATCACTAAAAGATTTTAGAGTGGAGAAAACATATCTTTTTGCGCGGAAGAAAATGGAAAACGGATCTCCCTTGACAGAGAATGGAATCTGA 1518 0.4104 MATRLFIRFVERYIGKFPHFVLCMMLEWVLIISLFIDGLLAFFITEFARFFDLEIPCWLCAKMNHFLTHKTPNFYYNSSMCESHKKDVSSLAFCYNHKKLSDTRKMCEGCLLSFATQKESDCDTYKSLVGVLSKNMEFFVEDGGNIQLSLKDERVTQVDINGTQRCSCCGAPLKPKSSISKGNNSGSILQAPTASPRAHPFIASKCEEYRGTESPRILNAKKDYELPRNEDDNNLKNQNIELKEVNKGGSWPILLGSDDITIESPKTPSFPWGNRFFGAPLTDSPNNSPKWSSISSVSGRKSPLEKMEFASDSVEGNCQDEEDGAVLNNLKRQVRLDRKSLMALYMELDEERSASAVAANNAMAMITRLQEEKAAMQMDASQYQRMMEEQIEYDEEVLQETNDLLVKLEEEVKTLDTELEIYREKYGCLTEDDVKAHGGNSFPTRSTEGEDGVENDFDLHQPGSSKAENGGGKFKESLKDFRVEKTYLFARKKMENGSPLTENGI* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4174 505 Coils Coil 391 425 - -
Mal5g4174 505 PANTHER MYOSIN-BINDING PROTEIN 2 1 488 IPR039306 GO:0017022
Mal5g4174 505 PANTHER MYOSIN-BINDING PROTEIN 6-RELATED 1 488 - -
Mal5g4174 505 ProSiteProfiles GTD-binding domain profile. 325 423 IPR007656 -
Mal5g4174 505 Coils Coil 359 386 - -
Mal5g4174 505 MobiDBLite consensus disorder prediction 433 475 - -
Mal5g4174 505 Pfam Zein-binding 329 419 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4174 Mal-Chr5 112215215 112216921 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4174 - - lja:Lj4g3v1598220.1 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4174 5 112215215 112216921 Mal5g4174 5 112215215 112216921 ECH