Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4164 ATGTCGTCACCGCAAAACGTAAAACAAAAGGTTTTCACATGTCTAAACAAACTCTCCGACCGCGACACTCACTCCCTCGCCGCCACGGAACTCGTCACAATTGCTCGGAACCTCGACACAACCACCGTACCGGTTTTCCTCTCTTGCATGTACTCCACCGACGCCTCTGACAAATCTCCGGTACGGAAGCAATGCGTTCAGCTCTTCGGATTACTCTCTGAAACTCACGGCAACGCGCTTTCTCCCTACCTCTCCAAAATCCTCGCCAACGTAATTCGTCGCCTCCGTGATTCGGACTCGTCGGTCCGATCCGCGTGCGTGAATTCCGTTTCAGCATTATCTTGCCACGTCACGAAGCAACCGTTTCATTCCTTTCTGAAACCGTTATCGGAAGCTCTGTTCACGGAGCAGGATCAGAACGCGCAGATTGGCGCTGCGCTTTGTCTCGCTTCGGCGATCGATGAAGCTCCGGATCCAGAACCTGCCAGATTAGCGAAGCTGTTACCGAAATTCCAGAAGCTTCTTAAGCGTGAAGTGTTTAAGGCGAAACCGGCGTTGTTGACGCTGATCGGAAGCGTTGTTGAAGCTGGTGGCGCGTCTGGTCACGCTTCCTTGAAGAATTTGGTTCCGTGTTTGGTGGAATCGTTGAGTAACCGCGATTGGGCGGTGAGGAAAGCTGCGGCGGAGACGCTGGTGGTTTTGGCTAACGTTGAGAGGGATTTCTTATCGGAATTCAAGGCTGATTGTTTGAAAGTTTTTGAGAATCGACGATTCGATAAGGTAAAGTTAGTTCGTGAAGTTATGAATCAGATGTTGGAAGCTTGGAAGCATATCCCTGATGTTTCTGATGAATTTTCGCCACCTCCTAAATCACAATCTTCTTCTAAAGAGAACGCAAGTGATGGGCAATATCCTCCGGTTTCTCAAAATTCATGTAATCCTGGTTCAGTAATGGCGAATCTACGGAGGAGATCTGCTCCTGTTAGCAGATTCAGTCCACCAGATAGTTCTACTGCTAGCAATGGCAAGAATGTGAGTGCCTTGACTAGTAACAAGCGAAGGGGTTCGGTTGTTTCGCGAAAATTAAACCAAAAGAATTGGGATGTTCAAGTGTCAATGGCTGATCAGGGTGATCACTCGGAGAGGGATGAAAATGAAACTCCTTTGGAAATAAGCAAAGTGGATAAAAGCAGATTTGTAAAGCCAGAAATGAATCGGGCACTGCTAAATAAAAATTCTGATGATAGAATAAAAAAGCAAGGTGGTTCCAAAGGTGGATCTCGTGTGGTTCCGTATCATGAAGAGAGTCAGGACTCAGTTCCTGTCAATAATGTCTCCAAAGATCTTTTTAAGAATGACAAAGAGAGTGAAGAGTTATCTTTGATCCGCAACCAGTTACAACAAATTGAGAAGCAACAGTCGAGTCTACTTGATCTTCTGCAGAAATTCATAGGAAGCTCACAAAATGGAATGCGATCTTTAGAGACCCGTGTACATGGCCTTGAGTTGGCACTGGATGATATCTCTTATGATTTGGCTGTATCAAATGGAAGGATGACAAATTCTAATGTCCCTCGTAATTCATGTTGCTTGCTACCTGGAGCAGAATTTTTGAGCTCTAAATTCTGGAGGAAAACACAGGGCCAGTATTCATCCCCACAGTTCTCTCGACGTGGTGGTGCTCCATCACTTGCTGGCGCTGCCATGCACTACACAGCTGGCAGGAATGCTGAAACTAATTTTACAAACCAAAGATTCAGGCTTGATGGAGGTTTTATCACTAATCCTCTTGCAGAGGTACACACTAATTCAAGGAACTTTGCTTGA 1827 0.4603 MSSPQNVKQKVFTCLNKLSDRDTHSLAATELVTIARNLDTTTVPVFLSCMYSTDASDKSPVRKQCVQLFGLLSETHGNALSPYLSKILANVIRRLRDSDSSVRSACVNSVSALSCHVTKQPFHSFLKPLSEALFTEQDQNAQIGAALCLASAIDEAPDPEPARLAKLLPKFQKLLKREVFKAKPALLTLIGSVVEAGGASGHASLKNLVPCLVESLSNRDWAVRKAAAETLVVLANVERDFLSEFKADCLKVFENRRFDKVKLVREVMNQMLEAWKHIPDVSDEFSPPPKSQSSSKENASDGQYPPVSQNSCNPGSVMANLRRRSAPVSRFSPPDSSTASNGKNVSALTSNKRRGSVVSRKLNQKNWDVQVSMADQGDHSERDENETPLEISKVDKSRFVKPEMNRALLNKNSDDRIKKQGGSKGGSRVVPYHEESQDSVPVNNVSKDLFKNDKESEELSLIRNQLQQIEKQQSSLLDLLQKFIGSSQNGMRSLETRVHGLELALDDISYDLAVSNGRMTNSNVPRNSCCLLPGAEFLSSKFWRKTQGQYSSPQFSRRGGAPSLAGAAMHYTAGRNAETNFTNQRFRLDGGFITNPLAEVHTNSRNFA* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4164 608 MobiDBLite consensus disorder prediction 411 440 - -
Mal5g4164 608 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 4 606 - -
Mal5g4164 608 Pfam HEAT repeat 208 236 IPR000357 GO:0005515
Mal5g4164 608 ProSiteProfiles HEAT repeat profile. 208 237 IPR021133 -
Mal5g4164 608 SUPERFAMILY ARM repeat 6 292 IPR016024 -
Mal5g4164 608 Coils Coil 452 472 - -
Mal5g4164 608 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 4 606 IPR033337 GO:0005874|GO:0008017
Mal5g4164 608 MobiDBLite consensus disorder prediction 330 373 - -
Mal5g4164 608 Gene3D - 3 372 IPR011989 -
Mal5g4164 608 MobiDBLite consensus disorder prediction 280 388 - -
Mal5g4164 608 MobiDBLite consensus disorder prediction 286 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4164 Mal-Chr5 112089407 112091851 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4164 - - gmx:100789197 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4164 5 112089407 112091851 Mal5g4164 5 112089407 112091851 ECH