Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4162 ATGGTTTCCGATTCAATCGCCGCCGCTCCGATTCCTTCCGCCGCTAACACCAAGAACCCTGGCAAAAAGAAGAGGACCAATAGGTCCGCGAAATTGAAGCAGTATAAGATTGATGCGCGTCGTGAACAATGGTTATCTCAAGGTGCGGTGAAGAAGAAGGGTTGCAAGGATGGAATGGATGATGAAGTCCATGTGCCGTCGTTGCCGGTGGGGAAACAGAGCAAACGTGAATTGGAGAAAGTGGAGACGAGGCGTAGAGGTGGAGAGGATGATGTGTTGATCCATCAAGACAGTGATTCGGAGTCGCCGTCAAACAGTCCTATCAGTCCTAATAGTAGTGTGTTGTGTGGTAATGATTCCGGGACGAATTTCACTGGTAGTAGCAGTGGTGGAAGCAGTAGTAGTAGTTCTAGCAGTGGTGGGTGTTGCTCCGGGAATATTACGGAAGAGGAAGAAGAAGATGATGAAGAAGAAGTAGAACAAGAGGAGGATGATGATGATGGATGCTTGGATGATTGGGAGGCTGTGGCAGATGCTTTAGCCGCCGATGAGAAGCATCGAGCCTCTTCTCAGGATGAACCCGTTGTGGAAACGGATTCAACTTGTGAAGTGACTAATTGTTTGAATTTAGGATGTTTGGATTCCAAACCAGGGAGTGGTGGAATGGTTCCTCGGGCTTCCAGTAATGGCAAAGCTTGGAGGGCTGATGATGCTTTTCGCCCTCAGACTTTGCCCAATCTTTCGAAGCAGCATAGTATGCCAAATCCACGTTTTGGAGGAGGGGTTCCCTGGTCTCGCGCGTCTGTGCCATCCAATTGTCCAATCTGCTGTGAGGATCTCGATTTGACGGACACAAGTTTTCTTCCATGCAACTGTGGTTTTCGGCTTTGTCTCTTTTGCCACAAGAGGATTCTTGAGCAGGATGCTCGTTGTCCTGGGTGCAGGAAGCAATATGAGTGTGAACCTATCGAGACAGAAGCAAGTGTGCATGGAGGTAGCCTTACTCTTCGGTTGGCTCGTTCTGTTAGCATGATCGAAATGTCTTGA 1047 0.4871 MVSDSIAAAPIPSAANTKNPGKKKRTNRSAKLKQYKIDARREQWLSQGAVKKKGCKDGMDDEVHVPSLPVGKQSKRELEKVETRRRGGEDDVLIHQDSDSESPSNSPISPNSSVLCGNDSGTNFTGSSSGGSSSSSSSSGGCCSGNITEEEEEDDEEEVEQEEDDDDGCLDDWEAVADALAADEKHRASSQDEPVVETDSTCEVTNCLNLGCLDSKPGSGGMVPRASSNGKAWRADDAFRPQTLPNLSKQHSMPNPRFGGGVPWSRASVPSNCPICCEDLDLTDTSFLPCNCGFRLCLFCHKRILEQDARCPGCRKQYECEPIETEASVHGGSLTLRLARSVSMIEMS* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4162 348 MobiDBLite consensus disorder prediction 73 97 - -
Mal5g4162 348 MobiDBLite consensus disorder prediction 1 169 - -
Mal5g4162 348 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 10 346 IPR039780 GO:0004842|GO:0030014
Mal5g4162 348 MobiDBLite consensus disorder prediction 98 145 - -
Mal5g4162 348 ProSiteProfiles Zinc finger RING-type profile. 273 315 IPR001841 -
Mal5g4162 348 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 265 330 IPR013083 -
Mal5g4162 348 CDD mRING-HC-C4C4_CNOT4 273 316 IPR039515 -
Mal5g4162 348 MobiDBLite consensus disorder prediction 147 169 - -
Mal5g4162 348 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 10 346 - -
Mal5g4162 348 SUPERFAMILY RING/U-box 271 324 - -
Mal5g4162 348 Pfam RING/Ubox like zinc-binding domain 273 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4162 Mal-Chr5 112034652 112035870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4162 - - gmx:100792365 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4162 5 112034652 112035870 Mal5g4162 5 112034652 112035870 ECH