Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4143 ATGGTAGTACTTTTTAACTTGCCATTTTCTCGGTGGACTTTCTACAAACACCTTACGCCCCGAAAATATACAACTCTCTGTCAGCACAAATCCACATCCAATCTCTCCCATTTCGTAACCCTAACCACCCGTCAGAAAGACCAGATTCATCTCTATGTCGATACACTTCTTCAATGGAACAAGCGCATGAATCTTACTGCAGTAAAAGAAGTGAATGAAGTTATGGAAAGACACATCGAGGACTCCCTCGCGATTTTGCCTCCGATGAGCGATAATTATGTTAGTCATTGCAGCAATTCCATCGATAAGGTTAAACTCGTCGATGTTGGAACTGGTGCAGGTCTTCCTGGAGTAGTTTTGGCCATTGCTCGACCAGATTGGGATGTAACGCTGATGGAGTCTATGAACAAGCGATGCGTTTTCTTAGAGCATGTTGTGGGTGTTATTGGATCCTCCAACGTTCAAATTGTAAGAGGAAGAGCAGAGAGTTTGGGGCAGAATCTTTGCTTCAGAGAGAAATTTGACATAGCAGTAGCCAGGGCAGTTGCAGAGACGAGAATATTAGCTGAGTATTGTCTTCCGTTGGTTCGTGTTGGGGGAATGTTTATTGCTGCCAAGGGTCATGATCCTGAGGATGAAGTTAAGAAAGCTGAAAGTGCCATAAAAAAAATGGGCGCATCATTATTGCAAGTATGCCCAGTGGAATCACAAAGCCCATATGGTCAGCGTACTGCTGTCATATGTCTGAAAGAACGTCCCACCTCAATGAAGTATCCCCGCAGTCCCGGGACACCAGCTAAAGAACCATTTAGTGATGTCATGACTTTGTTTATAGCATATCTTGTGATGCTACTCTCCTTGCACTTGTATAAATATACTTGCAAGCTGTCCTCACACTTCTTTTTCGCCATTGATCCATTCTTGTTCACGATCCCGAATTTCTCAACCGAATCCGCCGACGGTGGTGGTGGCGGTGATAGTGGTGGAGATCAGCCTAAAAGACCTAAGATAAAAAGGGTTGCTGTTAAGGTCAAGAAAATTGTTAACTCTGTTTTGTTGTTTATGAGAACTGGTTCTTTCAGATCATGTAGTTCTAAGTGTGCAATTTCTACTAGCTCCCCTGTTCCTACTTGCGTGTTCCTTTGA 1146 0.4354 MVVLFNLPFSRWTFYKHLTPRKYTTLCQHKSTSNLSHFVTLTTRQKDQIHLYVDTLLQWNKRMNLTAVKEVNEVMERHIEDSLAILPPMSDNYVSHCSNSIDKVKLVDVGTGAGLPGVVLAIARPDWDVTLMESMNKRCVFLEHVVGVIGSSNVQIVRGRAESLGQNLCFREKFDIAVARAVAETRILAEYCLPLVRVGGMFIAAKGHDPEDEVKKAESAIKKMGASLLQVCPVESQSPYGQRTAVICLKERPTSMKYPRSPGTPAKEPFSDVMTLFIAYLVMLLSLHLYKYTCKLSSHFFFAIDPFLFTIPNFSTESADGGGGGDSGGDQPKRPKIKRVAVKVKKIVNSVLLFMRTGSFRSCSSKCAISTSSPVPTCVFL* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4143 381 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 1 269 IPR003682 GO:0005737|GO:0006364|GO:0008649
Mal5g4143 381 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 36 270 IPR029063 -
Mal5g4143 381 Hamap Ribosomal RNA small subunit methyltransferase G [rsmG]. 38 247 IPR003682 GO:0005737|GO:0006364|GO:0008649
Mal5g4143 381 CDD AdoMet_MTases 105 200 - -
Mal5g4143 381 Pfam rRNA small subunit methyltransferase G 46 232 IPR003682 GO:0005737|GO:0006364|GO:0008649
Mal5g4143 381 Gene3D Vaccinia Virus protein VP39 22 271 IPR029063 -
Mal5g4143 381 TIGRFAM rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 51 242 IPR003682 GO:0005737|GO:0006364|GO:0008649
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4143 Mal-Chr5 111862901 111869852 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4143 K03501 - gmx:100818428 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4143 5 111862901 111869852 Mal5g4143 5 111862901 111869852 ECH