Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4140 ATGGAAAAGAAGCGAAAAAGGAAGCAAACGGCGGAGCGCGACGGCGATCAAAACCCAAACTCAGTTCAAGTAGCTCAAATCCAAACCGAGAATCCAAAAAACCCATTCCCTTCACACAGTAGACCCACCCCACAAGAATGCCTCGATATACGAGACACACTCTTAACCCTCCACGGCATACCTCCAGAACTCGCCAAGTATCGAAAATCACAACCAACCGACGACACCGTGGAGCCACCGGAAACCGTCCTTGACGGTTTAGTCCGAACCATACTCTCACAAAACACAACAGAAGCCAATTCTCAAAAAGCTTTCGTTTCTCTCAAATCGTTGTTTCCTACATGGGAACATGTGGATGGTGCTGAGAATAAGGAGTTGGAGAATGCTATTCGTTGTGGAGGTTTAGCGCCGACTAAGGCGAAATGTATTAAGAATTTGTTGCGTTGTTTGTTGGAGAGAAAGGGGAAAATGTGTTTGGAGTATTTGAGAGATTTGTCTGTTGATGAAGTTAAGGCTGAGTTGTCTCTTTTCAAAGGAATTGGTCCTAAAACAGTGTCTTGTGTGTTGATGTTCAACCTTCAGCTAGATGATTTTCCTGTGGACACTCACATATTTGAGATTGCAAAAACCATTGGTTGGGTACCAGCCGTTGCGGACAGAAACAAAACATACCTTCATCTAAACCAAAGGATCCCGGATGAACTTAAGTTTGACCTGAATTGCCTTCTGTATACTCACGGGAAGCTCTGCAGTAACTGCTCCAGTAAAAGAGGGAACAAGCAACAGAAGAAATTCAATGACAGCTCTTGTCCTTTATTAAATTATTATAAAGAGCCAGTTTGA 843 0.4342 MEKKRKRKQTAERDGDQNPNSVQVAQIQTENPKNPFPSHSRPTPQECLDIRDTLLTLHGIPPELAKYRKSQPTDDTVEPPETVLDGLVRTILSQNTTEANSQKAFVSLKSLFPTWEHVDGAENKELENAIRCGGLAPTKAKCIKNLLRCLLERKGKMCLEYLRDLSVDEVKAELSLFKGIGPKTVSCVLMFNLQLDDFPVDTHIFEIAKTIGWVPAVADRNKTYLHLNQRIPDELKFDLNCLLYTHGKLCSNCSSKRGNKQQKKFNDSSCPLLNYYKEPV* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4140 280 SUPERFAMILY DNA-glycosylase 77 276 IPR011257 GO:0003824|GO:0006281
Mal5g4140 280 CDD ENDO3c 87 247 IPR003265 GO:0006284
Mal5g4140 280 PANTHER - 3 277 - -
Mal5g4140 280 MobiDBLite consensus disorder prediction 15 36 - -
Mal5g4140 280 SMART endo3end 92 249 IPR003265 GO:0006284
Mal5g4140 280 MobiDBLite consensus disorder prediction 1 44 - -
Mal5g4140 280 Pfam HhH-GPD superfamily base excision DNA repair protein 88 231 IPR003265 GO:0006284
Mal5g4140 280 Gene3D - 68 250 IPR023170 -
Mal5g4140 280 Gene3D Hypothetical protein; domain 2 78 195 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4140 K10773 - gmx:100802952 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4140 5 111797712 111800500 Mal5g4140 5 111797712 111800500 ECH