Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4139 ATGATTCCTCGTCGCTACTATTCAGCATGTCTCCTTCTATTCCTCCTCCTACTTTCCACCTTCTCACAATCACAATCCCAATCCCATTGGTCTGCCAAGAAAAAACGCTTGAGAGAAAAAGTTCGTAATATGTTTCACCATGCTTATGACAACTATATGACTCATGCATTTCCGCACGATGAGCTAAAACCTCTCACCAAAACTTTTACCGATTCCCTAAGTGAGCTGGGAAATTTGAAGCTTGAACGTTTGCCGCAAGACTACAATGGCTCTGCCCTTTCGCTGATTGAATCGCTGTCTAGCCTTGTGATTATGGGCAACAATACCGAATTCGAGAAGGGAGTGCACTGGCTTTCAGAAAATCTAAAATTTGATGTTGATGCTCGCATTAATCTTTTTGAGTGCAACATTAGAGTTCTTGGAGGACTTGTCTCTGCTCATTTACTGGCATCTGATTCTTCAAAGAAGTTGATTCAAGGATCTTACAAGAATCAGCTACTAGGTCTGGCTGAAGATTTAGGGAAACGTTTTCTACCAGCGTTCAATACGCCCACTGGATTACCATATGCATGGATTAACTTAAAGTATGGAGTAATGGAGAATGAGACTACAGAAACAAGCACTTCAGGGTGTGGTTCCCTGATTCTTGAAATGGGTGCTTTATCAAAAATTACTGGTGATCCCATATATGAATCAGTAGCTTTACGAGCTCTCCGTAAGCTATGGAGTATGCAGAGCTCATTAAAACTATTTGGAACCACACTCGATGTGTCAACTGGGCAATGGATTGAACATTCATCGGGAATTGGAGCCGGGGTAGATTCCTTCTATGAATATCTGCTTAAAGCTCATATCCTTTTCGGAAAGGAGGAATTTTGGAGAATGTTTCATTCTGCTTATGTTGCTGTGCAGAAGCATTTCAGACACGGTCCATGGTACCATGAAGCTGATATGAGGACTGGAAGAGCAACTTATTGGCAGCTTACAAGTCTTCAAGCATTTTGGCCTGGCCTACAGGTTCTTATTGGGGATATATCTGCTGCTAATTCATCTCACCGTGAGTTTTTCCATGTGTGGAAGAGATTTGGAGTGCTACCGGAGAGGTATTTGCTGGACCATCAGATGCTTCATCCTACTGAAAAGTATTATCCGTTACGCCCTGAGTTTGCTGAGTCGACATTCTACTTATATCAAGCTACTAAAGATCCATGGTATATTGAAGTCGGTGAGTTAATAGTCAATTCCCTTAATTTACACACCAGAGTAGAAGGTGGGTTCGCAAGCATCAAGGATGTGACAACTATGCAGCTGGAAGATCATCAACATAGTTTTTTTCTTGCTGAAACGTGTAAATATTTATATCTTCTCTTTGATGATTCATTTATGCTCGAGAGCAATTACGTATTTACTACTGAAGGTCATCCCCTTCCCGTACTAAGCACTTGGCATGAAGTGCTTCCTGAAACTTATATTCCAACTAATTGGACCACTCTGAAGAGACAAACAGCAAATCGAGCCAGTGCAATGTCAATGCAAGTATGTCCTGCTATGACATTAAATTCGGGTCAACATATAGAGAGTGCTTGCCACATCTCCGATGTTCGTAGTGATCACAGGTGTTTGACCGATGAAGATTGTGGAGTTGATGCCACAACATGCAGAAGAAGATCATGTAGCATGGCTGGTTATTGTGGACTCTGGCTCTTTATTTGA 1713 0.4168 MIPRRYYSACLLLFLLLLSTFSQSQSQSHWSAKKKRLREKVRNMFHHAYDNYMTHAFPHDELKPLTKTFTDSLSELGNLKLERLPQDYNGSALSLIESLSSLVIMGNNTEFEKGVHWLSENLKFDVDARINLFECNIRVLGGLVSAHLLASDSSKKLIQGSYKNQLLGLAEDLGKRFLPAFNTPTGLPYAWINLKYGVMENETTETSTSGCGSLILEMGALSKITGDPIYESVALRALRKLWSMQSSLKLFGTTLDVSTGQWIEHSSGIGAGVDSFYEYLLKAHILFGKEEFWRMFHSAYVAVQKHFRHGPWYHEADMRTGRATYWQLTSLQAFWPGLQVLIGDISAANSSHREFFHVWKRFGVLPERYLLDHQMLHPTEKYYPLRPEFAESTFYLYQATKDPWYIEVGELIVNSLNLHTRVEGGFASIKDVTTMQLEDHQHSFFLAETCKYLYLLFDDSFMLESNYVFTTEGHPLPVLSTWHEVLPETYIPTNWTTLKRQTANRASAMSMQVCPAMTLNSGQHIESACHISDVRSDHRCLTDEDCGVDATTCRRRSCSMAGYCGLWLFI* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4139 570 Gene3D - 26 487 IPR012341 GO:0005975
Mal5g4139 570 PANTHER ALPHA-MANNOSIDASE I MNS5 16 569 - -
Mal5g4139 570 PANTHER ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 16 569 IPR044674 GO:0004571|GO:1904380|GO:1904382
Mal5g4139 570 Pfam Glycosyl hydrolase family 47 44 477 IPR001382 GO:0004571|GO:0005509|GO:0016020
Mal5g4139 570 PRINTS Glycosyl hydrolase family 47 signature 270 287 IPR001382 GO:0004571|GO:0005509|GO:0016020
Mal5g4139 570 PRINTS Glycosyl hydrolase family 47 signature 384 408 IPR001382 GO:0004571|GO:0005509|GO:0016020
Mal5g4139 570 PRINTS Glycosyl hydrolase family 47 signature 129 147 IPR001382 GO:0004571|GO:0005509|GO:0016020
Mal5g4139 570 PRINTS Glycosyl hydrolase family 47 signature 179 198 IPR001382 GO:0004571|GO:0005509|GO:0016020
Mal5g4139 570 PRINTS Glycosyl hydrolase family 47 signature 44 64 IPR001382 GO:0004571|GO:0005509|GO:0016020
Mal5g4139 570 PRINTS Glycosyl hydrolase family 47 signature 327 343 IPR001382 GO:0004571|GO:0005509|GO:0016020
Mal5g4139 570 PRINTS Glycosyl hydrolase family 47 signature 443 463 IPR001382 GO:0004571|GO:0005509|GO:0016020
Mal5g4139 570 SUPERFAMILY Seven-hairpin glycosidases 35 491 IPR036026 GO:0004571|GO:0005509|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4139 Mal-Chr5 111788000 111792899 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4139 3 567 Glycoside Hydrolase AT1G27520 75.220 0.0 906
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4139 K10084 - gmx:100793674 1031.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4139 5 111788000 111792899 Mal5g4139 5 111788000 111792899 ECH