Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4133 ATGGGTGACAATAAACGCAAGAGAGGTCGCAAACCCAAAAACCCCGAAACCCTAGAAACCACCGCCACCACCACCGCCACAACCACCGTCGCAGCCGACCCCTCCCCCATAATCGACGACGACTTCTCCGTCGGAAACGTCGAACTCATCGACAACGCACCCTCCACCCAACTCGGCCGTGGCCGTCGTGGCCGGCCCAAAAAGCTCCCCACCATTCCCGAGAAGCCACCCGCAGGCCGCCGCCTTACCCGCTCTGACAGCAACGGTGCTGTCCCGACGGTTCCGGTGGAAGTCGGCGGCGCTACTCCAATGGATGTGGACCCTATATGGGAGAGATTGTCGGCGAGGGTGTTGCCGTCGATGGATTCGGTGGTGAAAGTGTTCTGTGTTCATACAGAACCGAATTTTTCGCTTCCATGGCAGAGGAAGAGACAGTATAGCTCTAGTAGTAGTGGGTTTGTGATTAGTGGGAAGAGGGTTCTCACCAATGCGCATTCTGTGGAGCATTATACTCAGGTTAAGCTCAAGAAACGTGGCTCTGATACTAAGTATTTGGCTACTGTTCTTGCCATTGGAACTGAGTGTGACATTGCCATGCTTACTGTTGATGATGATGAGTTCTGGCAAGGGATGTCGCCTGTCGAGTTTGGGGAGTTGCCTACCCTTCAAGATGCAGTAACTGTTGTGGGCTACCCAATTGGAGGAGACACTATCTCTGTGACCAGTGGTGTTGTATCACGTATTGAGATTTTATCTTATGTCCATGGTTCCACAGAACTTCTAGGTTTACAGATAGATGCTGCTATAAATTCTGGAAATTCTGGTGGACCTGCATTTAATGGTAAAGGAAACTGTGTGGGGATAGCATTTCAGTCCCTCAAACATGAAGATGTGGAGAATATAGGTTATGTCATTCCAACACCAGTTATCACGCATTTCATCCAGGATTATGAGAAGAATGGAGGATATACTGGGTTCCCTATTCTTGGGGTTGAGTGGCAGAAAATGGAAAATCCTGATCTACGAATGGCAATGGGCATGAAATCTGATCAGAAAGGTGTGCGCATTAGAAGAATCGATCCTACTTCTCCTGAATCTAAGGTTTTGAAACCGTCAGATGTTATCCTTAGCTTTGATGGGGTTGATATTGCCAACGATGGAACAGTTCCATTTCGCCATGGAGAGCGCATTGGTTTCAGTTATCTCATTTCACAGAAGTATACTGGTGATGATGCAGCAATCAAAGTATTGCGGAATTCAAATGTCCTCAAATTCAATATTAAACTTGATGGTCACAGAAGGCTTATTCCAGCACACAGCAAGGGCAAGCCTCCCTCATATTATATTATTGCAGGATTTGTTTTTTCAACGGTTTCGGTTCCTTATCTTCGTTCTGAGTACGGAAAGGACTATGAGTATGAAGCTCCAGTCAAGATTTTGGATAAACTGCTGTATGCAATGCCACAATCACCAGACGAACAACTTGTTGTGATTTCTCAGGTGCTGGTGGCTGATATCAACATTGGATATGAAGAGATTGTTAACACCCAGGTCGTTGGCTTTAATGGTAAACCTGTGAAAAATCTTAAGAGTTTGGCCGCTATGGTAGAGAGCTGTGATGACGAGTATCTAAAATTTGATTTAGATTATGAACAGATAGTGGTCCTTCGCACGAAGACTGCAAAAGCTGCCACGCTAGATATTCTTGCAACACACTGCATTCCATCAGCAATGTCTGATGATCTCAAGTCATAG 1755 0.4632 MGDNKRKRGRKPKNPETLETTATTTATTTVAADPSPIIDDDFSVGNVELIDNAPSTQLGRGRRGRPKKLPTIPEKPPAGRRLTRSDSNGAVPTVPVEVGGATPMDVDPIWERLSARVLPSMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVISGKRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVDDDEFWQGMSPVEFGELPTLQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNGKGNCVGIAFQSLKHEDVENIGYVIPTPVITHFIQDYEKNGGYTGFPILGVEWQKMENPDLRMAMGMKSDQKGVRIRRIDPTSPESKVLKPSDVILSFDGVDIANDGTVPFRHGERIGFSYLISQKYTGDDAAIKVLRNSNVLKFNIKLDGHRRLIPAHSKGKPPSYYIIAGFVFSTVSVPYLRSEYGKDYEYEAPVKILDKLLYAMPQSPDEQLVVISQVLVADINIGYEEIVNTQVVGFNGKPVKNLKSLAAMVESCDDEYLKFDLDYEQIVVLRTKTAKAATLDILATHCIPSAMSDDLKS* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4133 584 MobiDBLite consensus disorder prediction 16 32 - -
Mal5g4133 584 Pfam PDZ domain 329 429 IPR001478 GO:0005515
Mal5g4133 584 Gene3D - 208 319 IPR043504 -
Mal5g4133 584 PANTHER PROTEASE DO-LIKE 9 4 583 - -
Mal5g4133 584 MobiDBLite consensus disorder prediction 1 15 - -
Mal5g4133 584 Gene3D - 109 207 IPR043504 -
Mal5g4133 584 MobiDBLite consensus disorder prediction 1 37 - -
Mal5g4133 584 SUPERFAMILY Trypsin-like serine proteases 121 321 IPR009003 -
Mal5g4133 584 Gene3D - 434 584 IPR046449 -
Mal5g4133 584 PANTHER - 4 583 - -
Mal5g4133 584 CDD PDZ_serine_protease 327 427 - -
Mal5g4133 584 Gene3D - 322 433 IPR036034 GO:0005515
Mal5g4133 584 MobiDBLite consensus disorder prediction 52 99 - -
Mal5g4133 584 Pfam Trypsin-like peptidase domain 151 288 - -
Mal5g4133 584 Pfam PDZ domain 436 581 IPR041517 -
Mal5g4133 584 SUPERFAMILY PDZ domain-like 352 434 IPR036034 GO:0005515
Mal5g4133 584 PRINTS HtrA/DegQ protease family signature 259 276 IPR001940 GO:0004252|GO:0006508
Mal5g4133 584 PRINTS HtrA/DegQ protease family signature 368 380 IPR001940 GO:0004252|GO:0006508
Mal5g4133 584 PRINTS HtrA/DegQ protease family signature 152 164 IPR001940 GO:0004252|GO:0006508
Mal5g4133 584 PRINTS HtrA/DegQ protease family signature 180 200 IPR001940 GO:0004252|GO:0006508
Mal5g4133 584 PRINTS HtrA/DegQ protease family signature 222 246 IPR001940 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4133 Mal-Chr5 111699067 111703827 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4133 K25897 - gmx:100817187 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4133 5 111699067 111703827 Mal5g4133 5 111699067 111703827 ECH