Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4113 ATGCCAAGTATTGTTGCAATTGAAGGAAATGAAATCAATAAACTTGAGAACCCTTCACCCTCTAGGAACTTCTTAAATAAAACCAATTCACCAAGAATACCATTGAGTCCACAAACACCTAAAAGTGTTGGGAGGTTTCATGAAATTGTACATGATACAAGTAGTTCTCGTCGATCACGCTCAAGTAAAAGCTTTGGATCTGAGAGTGATTGGTCTATATCTGATTCAGAGTTTAGTTATCTTGGTGGAGGAAAAATGAGGAATGTGGGGATAGTTAAAGAGGAAATGGAGAAAAGGATTGAGAGGAATTCTAGCAGTGAAACACCATTGAAATCAAGAGTTAAGGGAAAAAGTCCTTCTACAAAACCTCCTATTGAGAGAAAGAATGAAAGCAATCCTTTGAGAAAACAAAATACAACAGTTACTAATAATCATGTGGTAAAACCTAAGAGTTCTTCTATTGTAAGATCAAGGTCACAAGGTCGAGTCGAGAATTCCAAAGAATCAACATTTGATAATCCTGAGCTTGGACCATTTTTACTAAAGAAAGCAAGGGATTTGATTTCATTAGGAGATAATCCACGGAAAGCTCTTGAATTATCCCTTCAAGCGATGAATTTGTTTGAGAAATCTGCGAATGGAAAGCCAAGTTTGGATTTGGTTATGTGTTTACATGTTACTGCAGCAATATATTGCAGTTTGGGCCATTACAATGAGGCAATTGCAATTTTAGAGCGATCAATCGGGATTCCTGTCATCGAAGAAGGCCAACAACATGCTATTGCGAAATTCGCTGGTCACATGCAACTTGGAGACACTTATGCCATGCTAGGCCAGCTGGAGAACTCAATTATGTGTTACAATAAAGGGTTGGAAGTACAAAGAAATGTTTTGGGAGTAACTGATCCCAGAGTTGGTGAAACTTGTAGGTATGTGGCAGAAGCTAATTTTCAAGCATTGCAATTTAATGAGGCAGAGAGGTTGTGTCAAATAGCTCTTGATATTCACAGAGCAAATGGTTCACCTTCTTCTCTTGAAGAGGCAGCTGATAGAAGGTTGATGGGGCTTATATGTGAAACTAATGGAAATCATGAAGCAGCATTGGAGCACCTTGTTTTAGCAAGCATGGCAATGGTATCAAATGGCCAAGAAGTGGAAGTGGCATCTGTTGATTGCAGCATTGGAGACACATTCCTATCGTTGGCTCGATATGCTGAGGCGATCTTGGCGTATCAAAAGGCGTTGGCGGTTTTCAAAACTCACAAAGGAAAGAACCATCCTGCTGTTGGATCAGTTTTTGTACGTTTGGCTGAGTTGTACAATAGGACATGGAAGATAAGGGAATCAAAATCATATTGTGAAAATGCACTTAAAATCTATGAAAATCCCATGCCTGGTGTCCCTTCTGAGGAGATTGCTAGTGGTCTTGTGAATGTTGCAGCTATTTATGAGTCAATGAATGAGCTTGAACAAGCACTCAAGTTACTGCATAAGGCACTAGAGATACATAATGATGCTCCTGGTCAGCAGAACACAATAGCAGGAATAGAAGCTCAAATGGGGGTCATATACTATGTGTTGGAAAACCAGACTGAATCTTACAATGCTTTCAAGAATGCTGTCTCAAAGCTTCGCGCCACGGGAGAGAAAAAATCGGTTTTCTTTGGTATTGTTCTTAATCAAATGGGCCTTTGTTGTGTGCAACTTAATGCCTTGAGTGAGGCTGTCAAATTATTTGAAGAAGCAAAGATTGTTTTGGAACAAGAGTATGGTCCTTATCACCCTGAAACTCTTGGGGTGTGTAGCAATTTGGCTGGCACATATGATGCAATTGGAAGGGTGGACGACGCAATTGATATTATGGAGCACATTGTTGTTGTGAGGGAGGAAAAGCTTGGAACAGCACATTTTGATGTTGTTGATGAGAAGAGAAGGTTGGATGAGTTGTTGAAGGAAACGGGTAGAGTTCGGAACAGAAAAACCAAGTCACTTGAGATACTTCTTGATGTTGATGCTTGTACTCTATAA 2028 0.3979 MPSIVAIEGNEINKLENPSPSRNFLNKTNSPRIPLSPQTPKSVGRFHEIVHDTSSSRRSRSSKSFGSESDWSISDSEFSYLGGGKMRNVGIVKEEMEKRIERNSSSETPLKSRVKGKSPSTKPPIERKNESNPLRKQNTTVTNNHVVKPKSSSIVRSRSQGRVENSKESTFDNPELGPFLLKKARDLISLGDNPRKALELSLQAMNLFEKSANGKPSLDLVMCLHVTAAIYCSLGHYNEAIAILERSIGIPVIEEGQQHAIAKFAGHMQLGDTYAMLGQLENSIMCYNKGLEVQRNVLGVTDPRVGETCRYVAEANFQALQFNEAERLCQIALDIHRANGSPSSLEEAADRRLMGLICETNGNHEAALEHLVLASMAMVSNGQEVEVASVDCSIGDTFLSLARYAEAILAYQKALAVFKTHKGKNHPAVGSVFVRLAELYNRTWKIRESKSYCENALKIYENPMPGVPSEEIASGLVNVAAIYESMNELEQALKLLHKALEIHNDAPGQQNTIAGIEAQMGVIYYVLENQTESYNAFKNAVSKLRATGEKKSVFFGIVLNQMGLCCVQLNALSEAVKLFEEAKIVLEQEYGPYHPETLGVCSNLAGTYDAIGRVDDAIDIMEHIVVVREEKLGTAHFDVVDEKRRLDELLKETGRVRNRKTKSLEILLDVDACTL* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4113 675 Gene3D Tetratricopeptide repeat domain 183 374 IPR011990 GO:0005515
Mal5g4113 675 SUPERFAMILY TPR-like 386 518 IPR011990 GO:0005515
Mal5g4113 675 SUPERFAMILY TPR-like 471 624 IPR011990 GO:0005515
Mal5g4113 675 SMART tpr_5 264 297 IPR019734 GO:0005515
Mal5g4113 675 SMART tpr_5 473 506 IPR019734 GO:0005515
Mal5g4113 675 SMART tpr_5 430 463 IPR019734 GO:0005515
Mal5g4113 675 SMART tpr_5 388 421 IPR019734 GO:0005515
Mal5g4113 675 SMART tpr_5 306 339 IPR019734 GO:0005515
Mal5g4113 675 SMART tpr_5 221 254 IPR019734 GO:0005515
Mal5g4113 675 SMART tpr_5 556 589 IPR019734 GO:0005515
Mal5g4113 675 SMART tpr_5 348 381 IPR019734 GO:0005515
Mal5g4113 675 SMART tpr_5 514 547 IPR019734 GO:0005515
Mal5g4113 675 MobiDBLite consensus disorder prediction 14 37 - -
Mal5g4113 675 Gene3D Tetratricopeptide repeat domain 552 610 IPR011990 GO:0005515
Mal5g4113 675 Coils Coil 569 589 - -
Mal5g4113 675 ProSiteProfiles TPR repeat profile. 388 421 IPR019734 GO:0005515
Mal5g4113 675 Pfam MalT-like TPR region 320 535 IPR041617 -
Mal5g4113 675 Gene3D Tetratricopeptide repeat domain 375 551 IPR011990 GO:0005515
Mal5g4113 675 Pfam Tetratricopeptide repeat 268 296 IPR019734 GO:0005515
Mal5g4113 675 SUPERFAMILY TPR-like 267 370 IPR011990 GO:0005515
Mal5g4113 675 SUPERFAMILY TPR-like 180 296 IPR011990 GO:0005515
Mal5g4113 675 MobiDBLite consensus disorder prediction 134 160 - -
Mal5g4113 675 ProSiteProfiles TPR repeat profile. 473 506 IPR019734 GO:0005515
Mal5g4113 675 Coils Coil 486 506 - -
Mal5g4113 675 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 1 671 - -
Mal5g4113 675 PANTHER KINESIN LIGHT CHAIN 1 671 - -
Mal5g4113 675 MobiDBLite consensus disorder prediction 98 171 - -
Mal5g4113 675 MobiDBLite consensus disorder prediction 1 71 - -
Mal5g4113 675 Pfam Tetratricopeptide repeat 557 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4113 Mal-Chr5 111498472 111501344 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4113 - - gmx:100813461 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4113 5 111498472 111501344 Mal2g2374 2 29588211 29590983 ECH
Mal5g4113 5 111498472 111501344 Mal5g4113 5 111498472 111501344 ECH
Mal5g4113 5 111498472 111501344 Mal2g2374 2 29588211 29590983 PCT