Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4092 ATGGATGCTATAGAAATTGTGCATTTATCTAGTGACGATGAAGGGGAGGATGGTGTTGAAGTTGTTAGTTGTGTAAAACGACATGAGACCAACAAAGGCTTGCTGACCAAAAATGTGAGATCTCAAAGCCATTCTACAAGTCAAGTTTCTGAAGAAAATATCATATCGAGTGGTCCTAGTTCGTGTCGTAGTGTTACAGGTGCATCGGAGCTAGGCTTCCTGTCCGGTGATGACATTAGCCTTTCTAGTCCACAACCAATTTCTGCAGCACCACTTTGTAGGAAGTTTTGGAAAGCAGGAAACTATGATAACGGGCTTGGTTCGAAACTCAGCTCACAATATGCAAAAAACTATCTTCATGTCCACCCCTTGTTCCTTCACTCGAATGCAACTTCTCATAAGTGGGTATTTGGCGCCATAGCCGAGCTTCTTGATAATGCAGTTGATGAGATCCATAATGGAGCTACTTCTGTTAAGGTGGATAAGATTTTAAATCCGAAGGATGGAAGTTCAGCATTGTTGATTCAAGACGATGGTAGCGGAATGGATCCAGAAGCAATGCAACGTTGTATGAGTTTTGGATTTTCGGATAAGATGTCAAAAGATGCAATTGGGCAGTATGGAAATGGTTTTAAGACTGGTAGTATGAGATTGGGTGCAGATGCAATTGTCTTCAGCTGCCACATGAATGATATGGTATGTACTAAAAGCATTGGACTTCTGTCTTACACATTCTTGATGCGAGCACAGCTTGACAGAATTGTAGTGCCCATGGTAAGTTACAAGTGTAATACATCAACCGGATACCTGGAAAGACTAAATCACCAAGAGCATTTTATGTCTAATATGTCCCTGTTGTTGGACTGGTCTCCATTTCTATCAGAAGCAGAAATTGTGAAACAATTCGATGGCATTGGATATCATGGTACTAAAATTATTATCTTCAATTTATGGTTCAATGATGATGGGAATTTGGAACTAGACTTTGATACTGATCCTGAGGATATCCGTATTGCTGGAGATATCAAGAAGATTGTTACCCTTCCAGCCTGGAAGGGAGTAAATGAGCAACATGTTGCTAACCGGCTTCATTATTCTTTACGTGATTACCTGTCCATATTGTACTTGCGGGTACCAGAAAGTTTTAGTTTCATATTGCGAGGAAAAGCTGTGAAGCTTCGGAACATAGCAGATGATCTTAAAGATATAAAGTTTATCCGGTATAAACCACAAGTTGGTGGTTCAGAAGAGTCATTTTGGCCGGTTGTGAGCTCTACATGCAATAGGTGTAGAGGAGTTGTTGGCGTGTTGCAAGCAGATATTGTTCAGCCAACTCATAATAAGCAAGATTTTGAGAGAACTTCCCTGTTTCAAAAGCTTGAAATTCGCTTGAAGGATATGACGTGGGAATACTGGAATTGTCATTGCCATAAAATTGAGTATCTGGGAAAGAAGCATAGAAATCCAGTTGGCCCACGTAATTCATCAACGGAGAAACCACTTGTTACAGAAAACCCAGTTGCACAGGATAACTGTTCCTCACCTCTACCAATATCTAACGCACAAGGCGGATCTGAACAAACATCTCTTACTAAGAGGAAGACACGCGGATTTACAGATCATCGTGAGATGAAAAGGCAAGCAGTGGAAAAGAATGTACAGACTACCGCATCTCCTGCATACCAGATGCTAGCCCAAGAAACTGTGAACTTACTAGAATTCAACAAGAAACTCAATGCTGATTGTTTTGCATTTGAAAAGGTGGAGGAGGAACTTAACCTTAAGGTGACACAACTTAGGAGTAAACTCGAAGAAGCAAAGCTTGAGTATAATAGACTTTTGGCCGAAGCAATAGACTTAAAATGTCTGGACTGA 1875 0.4069 MDAIEIVHLSSDDEGEDGVEVVSCVKRHETNKGLLTKNVRSQSHSTSQVSEENIISSGPSSCRSVTGASELGFLSGDDISLSSPQPISAAPLCRKFWKAGNYDNGLGSKLSSQYAKNYLHVHPLFLHSNATSHKWVFGAIAELLDNAVDEIHNGATSVKVDKILNPKDGSSALLIQDDGSGMDPEAMQRCMSFGFSDKMSKDAIGQYGNGFKTGSMRLGADAIVFSCHMNDMVCTKSIGLLSYTFLMRAQLDRIVVPMVSYKCNTSTGYLERLNHQEHFMSNMSLLLDWSPFLSEAEIVKQFDGIGYHGTKIIIFNLWFNDDGNLELDFDTDPEDIRIAGDIKKIVTLPAWKGVNEQHVANRLHYSLRDYLSILYLRVPESFSFILRGKAVKLRNIADDLKDIKFIRYKPQVGGSEESFWPVVSSTCNRCRGVVGVLQADIVQPTHNKQDFERTSLFQKLEIRLKDMTWEYWNCHCHKIEYLGKKHRNPVGPRNSSTEKPLVTENPVAQDNCSSPLPISNAQGGSEQTSLTKRKTRGFTDHREMKRQAVEKNVQTTASPAYQMLAQETVNLLEFNKKLNADCFAFEKVEEELNLKVTQLRSKLEEAKLEYNRLLAEAIDLKCLD* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4092 624 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 135 338 IPR036890 -
Mal5g4092 624 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 418 616 IPR045261 GO:0016887
Mal5g4092 624 MobiDBLite consensus disorder prediction 41 60 - -
Mal5g4092 624 Pfam Morc6 ribosomal protein S5 domain 2-like 365 415 IPR041006 -
Mal5g4092 624 Pfam Morc6 ribosomal protein S5 domain 2-like 418 472 IPR041006 -
Mal5g4092 624 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 137 236 - -
Mal5g4092 624 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 6 416 IPR045261 GO:0016887
Mal5g4092 624 Gene3D - 111 318 IPR036890 -
Mal5g4092 624 Coils Coil 589 623 - -
Mal5g4092 624 PANTHER PROTEIN MICRORCHIDIA 6 418 616 - -
Mal5g4092 624 PANTHER PROTEIN MICRORCHIDIA 6 6 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4092 Mal-Chr5 111258372 111268436 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4092 - - mtr:MTR_4g105530 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4092 5 111258372 111268436 Mal2g2398 2 30034168 30046711 ECH
Mal5g4092 5 111258372 111268436 Mal5g4092 5 111258372 111268436 ECH