Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4086 ATGGCGCTGGTGCGTGTGTACCCAACATCCACCACTCTTCATCGTCTTGCTTCACCACTTTCCCTTAGAACCAAATTTCTGGTTCGAAGCTCTTCTAACCTTCAACTTCAAATGCAACCCAATAACTCACACAAGTTAGTTTTGGAAGTTAAGGAGAAGCTTGAAAAAGAACATCACAGTCTTCCTGTTGGTAGAAATGGCAGGGATGATGAAGATATGATACTATGGTTTCTGAAAGATCGCAAATTTGATGTTGAAGAAGCTGTTTCCAAATTGACTAAAGCCATTAAATGGCGTCAAGATTTTGAGGTGTCTAAATTGACGGAAGAATCTGTTAAAGGTGTTGCTCAAACCGGAAAAGCATATATACATGACTTTCTAGATGTCAATGACAGACCTGTGCTTGTGGTGGTCGCAGCAAAGCATTTTCCTAAAGCACAGGACCCCGCAGACGATGAGAGGTTATGTGTTTTCTTAATTGAGAAGGCATTGAGTAAGCTTCCAACTGGGAAAGAACAAATACTTGGAATATTTGATCTCAGAGGTTTTGGTACACAAAATGCTGATCTTACATACTTGACATTCTTGTTTAATGTGTTCTATTATTACTATCCCAAGCGATTGTCTCAAGTACTATTTGTGGATGCTCCTTTTGTGTTTAAGCCAATTTGGCAGCTTACCAAGCCGATGTTAAAATCATATGCTTCTCTGGTAAGATTTTGCTCTGCAGAGACTGTCAGGAAGGAATATTTTACAGATGAAACTTTGCCACCAAATTTCAGAGATTGA 789 0.3942 MALVRVYPTSTTLHRLASPLSLRTKFLVRSSSNLQLQMQPNNSHKLVLEVKEKLEKEHHSLPVGRNGRDDEDMILWFLKDRKFDVEEAVSKLTKAIKWRQDFEVSKLTEESVKGVAQTGKAYIHDFLDVNDRPVLVVVAAKHFPKAQDPADDERLCVFLIEKALSKLPTGKEQILGIFDLRGFGTQNADLTYLTFLFNVFYYYYPKRLSQVLFVDAPFVFKPIWQLTKPMLKSYASLVRFCSAETVRKEYFTDETLPPNFRD* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4086 262 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 111 262 IPR001251 -
Mal5g4086 262 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 21 262 - -
Mal5g4086 262 CDD SEC14 132 260 IPR001251 -
Mal5g4086 262 Pfam CRAL/TRIO domain 117 257 IPR001251 -
Mal5g4086 262 SUPERFAMILY CRAL/TRIO domain 110 250 IPR036865 -
Mal5g4086 262 SMART sec14_4 115 260 IPR001251 -
Mal5g4086 262 Gene3D - 19 260 IPR036865 -
Mal5g4086 262 SUPERFAMILY CRAL/TRIO N-terminal domain 43 111 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4086 Mal-Chr5 111224825 111227705 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4086 - - vun:114175521 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4086 5 111224825 111227705 Mal5g4086 5 111224825 111227705 ECH