Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4084 ATGTCATCAACCGTAAGAGATCACAGGATCATTCGTGGAATGACAAGCCTTCCACGAAGCATAATGAGCTTTGTGGGAATAGGAAGAAGAAGAAGAAATCAAAATGAAAATTTTCCGCAATTTCTAGACCCTCCACAACCACAAAATTCCTTTGCAGCTCCAGAAGAATGGGCTTTTCAAGACCATTTTGAGCAACAATATGGCACAAATCATCCCTTCTTTTATGCTTGTCGTTTCAATGAAGCAATGAAGTTAGCAGAACAAGATAAAAAATTTGTGTTCATGTATCTTCATTCAGTAGACCACCCTTTTGCAAACTTTTTCTGCAAGGAAACTCTGTGTTCAGAGCTAGTGATTCAGTTTCTTGATGTGAATTTTGTTTGTTGGGGTGCACTTGCAGATAGAGGAGAGGGTTTGCAAATGGTTTCAACATTGAGACCTTCTAGCTTTCCTTGTTGTGCTGTCATAAGCCCTGCTCCTAGTGATAGCATAATAGTGTTACAACAGCTAGAGGGACCACTCTCACCAACAGAGCTAGTTGAGATTCTACAAACAACATTGGAAGAACAAGGGTTGGCTTTTGGAAGTGCTAAAGCTAAGCGAGATGAAAAGATTCGAGCAGACCGTAGGCTCAGAGAAGAGCAAGATGTTGCATATCTTGAGGCTTTGCAAATAGACAAGGAAAAAGAAAAACTCAAAAGTTTACCTTCAAGAGAGAGAGATCAGAAGCCAATGGAAACTCAGAACACCAGAAATCATGGCAAGTTAAAGAACAATTCTATCAATGTCAGTAAATCTCATAATAATAACAGAGAAAATGGATCCACTAGTGAAAAAAATGACAAGGGAATGGCACAGATACTCATAAGGTTTCCAAATGGGGAAAGAAGAGAACATACTTTCCTATGCATAGACAAAATTCAATCAATTTTTTCATATATTGATTCATTAGGTTTGTCTGGAATTGGAAACTACAGACTCATATCAAATTTTCCAAGAAGAGTTTATGGTGTTGATCAAATGAGAATGACTCTAAAAGATGTTGGCTTGTATCCTAAAGCTAGTTTGTTCTTGGAGCCTTTGTGA 1086 0.3803 MSSTVRDHRIIRGMTSLPRSIMSFVGIGRRRRNQNENFPQFLDPPQPQNSFAAPEEWAFQDHFEQQYGTNHPFFYACRFNEAMKLAEQDKKFVFMYLHSVDHPFANFFCKETLCSELVIQFLDVNFVCWGALADRGEGLQMVSTLRPSSFPCCAVISPAPSDSIIVLQQLEGPLSPTELVEILQTTLEEQGLAFGSAKAKRDEKIRADRRLREEQDVAYLEALQIDKEKEKLKSLPSRERDQKPMETQNTRNHGKLKNNSINVSKSHNNNRENGSTSEKNDKGMAQILIRFPNGERREHTFLCIDKIQSIFSYIDSLGLSGIGNYRLISNFPRRVYGVDQMRMTLKDVGLYPKASLFLEPL* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4084 361 CDD UBX 287 359 - -
Mal5g4084 361 SMART ubx_3 277 360 IPR001012 GO:0005515
Mal5g4084 361 Gene3D - 279 360 - -
Mal5g4084 361 ProSiteProfiles UBX domain profile. 280 358 IPR001012 GO:0005515
Mal5g4084 361 SUPERFAMILY Thioredoxin-like 53 192 IPR036249 -
Mal5g4084 361 Gene3D Glutaredoxin 54 192 - -
Mal5g4084 361 PANTHER UBIQUITIN-ASSOCIATED (UBA) PROTEIN-RELATED 8 360 - -
Mal5g4084 361 MobiDBLite consensus disorder prediction 230 250 - -
Mal5g4084 361 SUPERFAMILY Ubiquitin-like 237 360 IPR029071 -
Mal5g4084 361 PANTHER FAS-ASSOCIATED PROTEIN 8 360 - -
Mal5g4084 361 SMART 45neu3 58 184 IPR006577 -
Mal5g4084 361 CDD UAS 79 189 - -
Mal5g4084 361 Pfam UBX domain 281 359 IPR001012 GO:0005515
Mal5g4084 361 MobiDBLite consensus disorder prediction 251 271 - -
Mal5g4084 361 MobiDBLite consensus disorder prediction 230 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4084 Mal-Chr5 111208384 111210206 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4084 K18726 - gmx:100775212 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4084 5 111208384 111210206 Mal5g4084 5 111208384 111210206 ECH