Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4083 ATGGACATGAAAGGATATTCAGTTTCTTGGACAAACAAACATATGAAAGAGTCTTTATTTTCAGCTCAACTCACAAGAAGACAACACCAATGCAAACAAGAAAATCATGTTGTCTCAGAACAAACAACTTCACTAAATCATTCCCTCAAATTGTCTTCTTCTTCTTCTTCCATTTCCCTAAATACTCTAAAACCTATTCTACATGTTTTTGTTACTTTGCTTCTGTTTCTTACCTCAATTAGTCCAATTTTGTCACACCCCATTGTCTCAAATTCAACTTCATCACAAGTACAATCTCACTCTCACTCCAATGCTAACCAAACTTTTAGACCAGATGTTGCATTGCATAAATTGAAGAGAATCAGAGCTCACTTGAAGAAAATCAACAAGCCTCCCATCAAGACAATTAAGAGTCCAGATGGGGATTTGATAGATTGTATTATATCTCATCAACAACCAGCTTTTGACCATCCACAACTCAAAGGACAAAAACCATTGGATCCACCAGAAAGACCAAAAGGGTACAACAATGGAGAAAATGCAACAAATAATTTTCAGCTTTGGATTGATTCTGGTGAAGAATGTCCTATAGGAACTGTTCCAATCAGAAGAACAACAGAACAAGATTTTCTTAGAGCAAGTTCTGTTAGAAGATTTGGAAGAAAACCAAGAGGTGTACGGAGAGACTCAACAGGCACTGGTCATGAGCATGCAGTTGTTTTTGTAAATGGGGAACAATATTATGGAGCAAAAGCAAGCATAAATGTGTGGACACCAAGGGTAACAGATCAATATGAATTCAGCTTGTCACAGATTTGGGTTATTGCTGGATCATTTGGTCATGATCTTAATACATTAGAAGCTGGATGGCAGGTAAGCCCTGAATTATATGGTGACAATTATCCTAGATTCTTCACTTATTGGACTACGGATGCATATCAAGCAACTGGATGTTACAATTTACTATGTTCAGGATTTATCCAAACAAACAACAGGATAGCAATAGGGGCTGCAATTTCCCCAAGATCTTTCTATAATGGAAGACAATTTGATATTGGTTTAATGATTTGGAAAGACCCAAAGCATGGACATTGGTGGCTTGAATTTGGATCAGGTCTTCTAGTTGGATATTGGCCAGCAAATTTGTTTAGTCACTTGAGAAGTCATGCAAGCATGGTACAATTTGGAGGAGAAATTGTGAATTCACGTTCAAGGGGATATCACACTGGCACTCAAATGGGAAGTGGACATTTTTCAGAAGAAGGTTTTAGAAAAGCAGCTTATTTTAGAAACTTACAAGTAGTTGATTGGGACAATAACTTGCTTCCTCTATCAAATATCCATCAATTGGCTGATCATTCAAATTGCTATGATATTAAGGAGGGAAGAAATAATGTTTGGGGAACTTATTTTTATTATGGAGGTCCTGGAAGAAATGTGAGATGTCCATGA 1452 0.3691 MDMKGYSVSWTNKHMKESLFSAQLTRRQHQCKQENHVVSEQTTSLNHSLKLSSSSSSISLNTLKPILHVFVTLLLFLTSISPILSHPIVSNSTSSQVQSHSHSNANQTFRPDVALHKLKRIRAHLKKINKPPIKTIKSPDGDLIDCIISHQQPAFDHPQLKGQKPLDPPERPKGYNNGENATNNFQLWIDSGEECPIGTVPIRRTTEQDFLRASSVRRFGRKPRGVRRDSTGTGHEHAVVFVNGEQYYGAKASINVWTPRVTDQYEFSLSQIWVIAGSFGHDLNTLEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFIQTNNRIAIGAAISPRSFYNGRQFDIGLMIWKDPKHGHWWLEFGSGLLVGYWPANLFSHLRSHASMVQFGGEIVNSRSRGYHTGTQMGSGHFSEEGFRKAAYFRNLQVVDWDNNLLPLSNIHQLADHSNCYDIKEGRNNVWGTYFYYGGPGRNVRCP* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4083 483 PANTHER CARBOXYL-TERMINAL PEPTIDASE 50 483 - -
Mal5g4083 483 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 50 483 - -
Mal5g4083 483 Gene3D - 256 370 - -
Mal5g4083 483 Pfam Neprosin activation peptide 135 240 IPR025521 -
Mal5g4083 483 Pfam Neprosin 265 476 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4083 Mal-Chr5 111177271 111180897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4083 - - gmx:100820129 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4083 5 111177271 111180897 Mal2g2404 2 30127567 30131503 ECH
Mal5g4083 5 111177271 111180897 Mal5g4083 5 111177271 111180897 ECH
Mal5g4083 5 111177271 111180897 Mal2g2404 2 30127567 30131503 PCT