Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4078 ATGGCTTCCCCAAGTCTCGACGATCAAGAATTTGATTTCGGAGGCGAAGTTAGCGTAACGCGTTCAGATGCTATTGGTAATAAGAGATCATCTCCTGAATTTGATGACGGTGATTTTGATCCTACCGGAAAAAAGGCTAAAACTGTAGCTGAAGTAGAAGCTGCTTCTGGTGTTACAACTGGAATGATTTTGTCTCTTCGCGAGAGTCTTCAAAACTGTAAGGATACGCTTGACTCGTGCCTGAATGAACTCGAGGATGCACAATACGAGATTGAGATTTGGCGCTCTGCATTTCAAAATGCACCATTCATACCTGCTGGGACCACGCCAGTACCTAAATTGGTGATTAATTACCTTCAAGCACTGAAATCATCGGAAGAGTCCTTAGCGGATCAGCTTGAAAAGGCAAAGAAAAAGGAAGTTGCATTCATTGTGACATTTGCTAAACGTGAGCAAGAGATAGCAAAGCTGAAGTCTGCTGTACGGGACCTCAAAGCTCAACTCAAGCCAGCATCAATGCAGGCAAGGAGGTTCTTACTAGATCCGGTAATTAATGAAGAGTTCACGCGATTAAAGAATTTAGTTGCGGAAAAGGATGCAAGAGTAAAGGAGTTGCAAGATCAATCTTCTGCTGTAAAATTTACTTCCCAAAGCAAGATGGGGAAGTTGCTAATGGCTAAATGTAAAACTCTGCAAGAGGAAAATGAGGAGATTGGCCTTCAAGCGTCTGAGGGCAAGATGCTTGAATTAGCAATGAAACTTTCATTGCAGAAAGATCAGAATTCAGAGCTCAGAAATCAATTTGAAGAGTTGCAGAAGCATATGGGTGGATTGACCAATGATGTGGAAAGATCTAATGAAACGGTTTTCATGTTGCAAGATAAATTAAATGAGAAGGATCAGGAGATCCAAAGGTTGAAATATGAGTTGCATCTAAAAAAGCTTCGCAAAGAACAGGAGAACAAATGCAGCATCTAA 978 0.4131 MASPSLDDQEFDFGGEVSVTRSDAIGNKRSSPEFDDGDFDPTGKKAKTVAEVEAASGVTTGMILSLRESLQNCKDTLDSCLNELEDAQYEIEIWRSAFQNAPFIPAGTTPVPKLVINYLQALKSSEESLADQLEKAKKKEVAFIVTFAKREQEIAKLKSAVRDLKAQLKPASMQARRFLLDPVINEEFTRLKNLVAEKDARVKELQDQSSAVKFTSQSKMGKLLMAKCKTLQEENEEIGLQASEGKMLELAMKLSLQKDQNSELRNQFEELQKHMGGLTNDVERSNETVFMLQDKLNEKDQEIQRLKYELHLKKLRKEQENKCSI* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4078 325 MobiDBLite consensus disorder prediction 28 43 - -
Mal5g4078 325 Coils Coil 188 208 - -
Mal5g4078 325 Coils Coil 289 309 - -
Mal5g4078 325 Pfam WTAP/Mum2p family 135 289 IPR033757 GO:0000381|GO:0005634|GO:0080009
Mal5g4078 325 PANTHER PROTEIN OF 37 KDA-LIKE PROTEIN, PUTATIVE-RELATED 1 317 - -
Mal5g4078 325 Coils Coil 70 90 - -
Mal5g4078 325 MobiDBLite consensus disorder prediction 1 43 - -
Mal5g4078 325 Coils Coil 147 167 - -
Mal5g4078 325 Coils Coil 254 281 - -
Mal5g4078 325 Coils Coil 119 139 - -
Mal5g4078 325 PANTHER WILMS' TUMOR 1-ASSOCIATING PROTEIN 1 317 IPR033757 GO:0000381|GO:0005634|GO:0080009
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4078 Mal-Chr5 111103895 111112352 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4078 K22824 - gmx:100776997 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4078 5 111103895 111112352 Mal5g4078 5 111103895 111112352 ECH