Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4076 ATGATGATGGCAAATCTTCCAGCTATGCTCTCTTTGAGGCACTTGCTGGTGTTATCACTGGCTTTGAATGTTAGCTTGATTCTGAAAATGGTGTATGAAGGTGATCAACAAGGAAGCAACAAGAACAACAACATGGAAGGGTATAAAAGGATTATCCAAAAATCACGTTTGGTTATACCCTCTACAACTTCTTTGGCTAATTATACTCGTAAAGATCATTCTGGAGTCGTGGATAAAATAATCAACCTTGACCATGGCGACCCAACAATGTACGAACGTTATTGGCGACAAATGGGAGACAGGACAACAATAACAATTCCAGGATGGCAATCTATGAGTTATTTTTCTGATCCAACAAGCATTTGTTGGTTTCTTGAACCAGAATTTGCTAAGGAAGTAGTGAGGTTACACAATGTGGTTGGAAATGCTGTAACACAAGGCCGCCACGTTGTTGTTGGAACAGGTTCATCTCAGTTAATTCTAGCTGCTCTTTATGCTCTCTCTTCCCCTCATGCCTCTGAACCCATCACCGTTGTATCTGCCGTACCTTACTACTCGTCGTATCCATTGATGACAGATTACCAGAAATCAGGACTTTACAAATGGGGTGGTGATGCAGAGACTTTTGACAAAGATGGTCCTTACATTGAGCTGGTTACGTCTCCTAATAACCCTGATGGGTATACAAGGAAATCAGTAGTGAAAAAAATCAAAGGACTATTGATCCATGACCTTGCTTATTATTGGCCACAATACACTCCAATATTATCTCCTTCAGATTATGATCTTACTCTTTTCACTGTCTCAAAAAGCACTGGTCATGCTGGAATGCGCATAGGGTGGGCTCTTGTCAAAGACCCTGAGATAGCAAAGAAAATGACTAAATTCGTAGAGCTAAATACAATTGGTGTCTCCAAAGATTCTCAACTCAGAGCTGCCAAGGTTTTGAAAGCAGTGTCTGACAGCTGTGAAGAAGAAAATTCTCAAGGTGGAGAAGAATCATTTTTCAAGTACAGCTACAAGGCCATGGAGCAAAGGTGGAAGCTACTGAGAGAAGCAGTTGATAGTGGTGATTTATTCAGTTTGCCCAAATTTTCTTCTGCATTCTGCACCTTTCTCAATCAGGAGTCGGAGACTCAACCAGCTTTTGCTTGGTTGAAGTGTGAAGGGGATATAGAGGACTGCGAAAGTTTCCTTCGTGGACACAAGATTTTGACTAGAAGTGGAAAACAATTTGGGGCTAGCCCAAAGTATGTAAGAATAAGCATGCTGGATACAGATGAAAATTTTATGCAGTTTATAGACAGGCTAACTATCATACAGCAGTGA 1329 0.4093 MMMANLPAMLSLRHLLVLSLALNVSLILKMVYEGDQQGSNKNNNMEGYKRIIQKSRLVIPSTTSLANYTRKDHSGVVDKIINLDHGDPTMYERYWRQMGDRTTITIPGWQSMSYFSDPTSICWFLEPEFAKEVVRLHNVVGNAVTQGRHVVVGTGSSQLILAALYALSSPHASEPITVVSAVPYYSSYPLMTDYQKSGLYKWGGDAETFDKDGPYIELVTSPNNPDGYTRKSVVKKIKGLLIHDLAYYWPQYTPILSPSDYDLTLFTVSKSTGHAGMRIGWALVKDPEIAKKMTKFVELNTIGVSKDSQLRAAKVLKAVSDSCEEENSQGGEESFFKYSYKAMEQRWKLLREAVDSGDLFSLPKFSSAFCTFLNQESETQPAFAWLKCEGDIEDCESFLRGHKILTRSGKQFGASPKYVRISMLDTDENFMQFIDRLTIIQQ* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4076 442 Pfam Allinase 81 439 IPR006948 GO:0016846
Mal5g4076 442 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 442 - -
Mal5g4076 442 Gene3D - 45 121 IPR037029 GO:0016846
Mal5g4076 442 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 1 442 - -
Mal5g4076 442 CDD AAT_like 127 437 - -
Mal5g4076 442 Gene3D Aspartate Aminotransferase, domain 1 333 441 IPR015422 GO:0003824
Mal5g4076 442 Gene3D - 126 329 IPR015421 GO:0003824
Mal5g4076 442 SUPERFAMILY PLP-dependent transferases 74 437 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4076 Mal-Chr5 111070631 111079338 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4076 K16903 - gmx:100818522 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4076 5 111070631 111079338 Mal5g4076 5 111070631 111079338 ECH
Mal5g4076 5 111070631 111079338 Mal2g2413 2 30269827 30277097 PCT