Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4063 ATGGGCTCTGCTCTGGCGATAAAGGTGAAATATGGAAATACCTTCAGGCGCTTCAGTGTTCGTGTGGATGAGAATAATCGAACAGATCTTAACATGGTTAGATTGAAGGCTAAGATACGGTCTATTTTCAAGTTTACTGCTCAAGCAAATTTCTTTATGAGATATGTTGATGAAGAGGGCGACATGGTGATTCTTGTGGATGATGATGATTTCCATGACATGATGAGCCAGCAAATGAAATTCTTGAGAATTGAAGTACATATGATAAATAATCCTGGTAAAAGAACATGGAACGGAATAATATATAATAAAGAAATATTATTTTACACTTTTGTTTACGTTTTTGTTGTTGTGGTTTTGGCTGGGTTGTGTTTAGCAATTATTTTGAATCTACCAGACCACGAACCCGAAACAAAATTGGTTAAAGTCTTTGATATTGATTTTGAGTCTTTTGGCTCTGATCAAGTCTATCATCCTTTAAGTGAGTGA 489 0.3538 MGSALAIKVKYGNTFRRFSVRVDENNRTDLNMVRLKAKIRSIFKFTAQANFFMRYVDEEGDMVILVDDDDFHDMMSQQMKFLRIEVHMINNPGKRTWNGIIYNKEILFYTFVYVFVVVVLAGLCLAIILNLPDHEPETKLVKVFDIDFESFGSDQVYHPLSE* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4063 162 SMART PB1_new 4 89 IPR000270 GO:0005515
Mal5g4063 162 Gene3D - 2 88 - -
Mal5g4063 162 Pfam PB1 domain 6 87 IPR000270 GO:0005515
Mal5g4063 162 ProSiteProfiles PB1 domain profile. 4 89 IPR000270 GO:0005515
Mal5g4063 162 PANTHER OVARIAN CARCINOMA ANTIGEN CA125-RELATED 5 94 - -
Mal5g4063 162 PANTHER PROTEIN ILRUN 5 94 - -
Mal5g4063 162 SUPERFAMILY CAD & PB1 domains 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4063 Mal-Chr5 110854898 110855956 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4063 K17987 - mtr:MTR_4g104990 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4063 5 110854898 110855956 Mal5g4063 5 110854898 110855956 ECH