Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4030 ATGGAAATGAAGAAGCTCTTGTTTGTTTCCTTATCCCTTGCTTTGATTTTCGGAATAGCCAAGAGCTTTGATTTCCAGGAGAATGATTTAGCATCAGAGAAAAGTTTGTGGGATTTGTACGAGAGATGGAGAAGTTACCACACAGTTACTCGAAGCCTTGATGAGAAGCATAATCGCTTCAACGTGTTCAAAGCCAATGTTATGCATGTTCACAATACAAATAAATTGGATAAGCCTTATAAGCTTAAGTTGAATAAGTTTGCTGACATGACTAATTATGAATTTAGGAGCATCTATGCTAATTCTAAGGTTAATCATCATAGAATGTTCCGTGGCATGTCACATGACAGTGGGACTTTTATGTATGAGAATGTGGAGAATGTTCCTTCTTCGATTGATTGGAGGGAGAAAGGTGCTGTTGTTGGTGTAAAGGATCAAGGCCAATGCGGTAGTTGTTGGGCATTTTCAACTATTGTAGCTGTTGAAGGTATTAACCAAATCAAGACAAAAAAACTAGTATCCTTGTCTGAGCAAGAACTTGTGGATTGCGACACTGAAGTAAATCAAGGATGCAATGGTGGGTTAATGGAATATGCGTTCGAGTTCATCAAGCAAAAGGGCATAACAACAGAAACCAATTATCCTTATGCTGCAAAAGATGGAACCTGTAATATACAAAAGGAGAATAAGCCAGCAGTGTCAATTGATGGCCATGAGAATGTCCCTGTCAACAATGAAGCTGCATTGCTGAAAGCTGCAGCCAATCAACCTATTTCTGTAGCCATAGATGCTGAGGGGTCTGATTTCCAGTTCTATTCAGAGGGAGTATTTACTGGACACTGTGGCACTGAGCTGAATCATGGGGTAGCAATTGTGGGGTATGGAGCAACTCAAGATGGAACAAAATATTGGACAGTGAGAAACTCTTGGGGAAGTGAATGGGGAGAACAGGGTTACATTAGAATGCAAAGGGCCATATCTCACAAGGAAGGTTTATGTGGCATAGCTATGGAGGCTTCCTATCCAACAAAAAGTTCACTTCCTAAAGATGAACTCTAA 1059 0.4023 MEMKKLLFVSLSLALIFGIAKSFDFQENDLASEKSLWDLYERWRSYHTVTRSLDEKHNRFNVFKANVMHVHNTNKLDKPYKLKLNKFADMTNYEFRSIYANSKVNHHRMFRGMSHDSGTFMYENVENVPSSIDWREKGAVVGVKDQGQCGSCWAFSTIVAVEGINQIKTKKLVSLSEQELVDCDTEVNQGCNGGLMEYAFEFIKQKGITTETNYPYAAKDGTCNIQKENKPAVSIDGHENVPVNNEAALLKAAANQPISVAIDAEGSDFQFYSEGVFTGHCGTELNHGVAIVGYGATQDGTKYWTVRNSWGSEWGEQGYIRMQRAISHKEGLCGIAMEASYPTKSSLPKDEL* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4030 352 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 146 157 IPR000169 -
Mal5g4030 352 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 20 346 - -
Mal5g4030 352 Pfam Papain family cysteine protease 128 343 IPR000668 GO:0006508|GO:0008234
Mal5g4030 352 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 285 295 IPR025660 -
Mal5g4030 352 SMART Inhibitor_I29_2 40 95 IPR013201 -
Mal5g4030 352 SMART pept_c1 128 343 IPR000668 GO:0006508|GO:0008234
Mal5g4030 352 CDD Peptidase_C1A 129 342 IPR039417 -
Mal5g4030 352 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 303 322 IPR025661 -
Mal5g4030 352 SUPERFAMILY Cysteine proteinases 37 343 IPR038765 -
Mal5g4030 352 Pfam Cathepsin propeptide inhibitor domain (I29) 40 95 IPR013201 -
Mal5g4030 352 PRINTS Papain cysteine protease (C1) family signature 146 161 IPR000668 GO:0006508|GO:0008234
Mal5g4030 352 PRINTS Papain cysteine protease (C1) family signature 287 297 IPR000668 GO:0006508|GO:0008234
Mal5g4030 352 PRINTS Papain cysteine protease (C1) family signature 303 309 IPR000668 GO:0006508|GO:0008234
Mal5g4030 352 Gene3D Cysteine proteinases 15 345 - -
Mal5g4030 352 PANTHER KDEL-TAILED CYSTEINE ENDOPEPTIDASE CEP1 20 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4030 Mal-Chr5 110128101 110130050 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4030 K16292 - gmx:100806581 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4030 5 110128101 110130050 Mal5g4030 5 110128101 110130050 ECH
Mal5g4030 5 110128101 110130050 Mal2g2463 2 31029334 31031159 PCT