Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4019 ATGGCTTCGCAGGATAAAGGTCGACCATTGCCTAAATTTGGTGAGTGGGATGTGAACAATCCTGCTTCAGCTGAAGGTTTTACTGTTATTTTCAACAAGGCTAGAGATGAGAAGAAGACCAATTCTGTCAACATTCCTACCCCACGTAAAGTTGATCCTGTCTTCAAGAATGACAACTATCCTCAATACACTCGAAAGAGTAAGTGGTTTTGCTGCGGTTGA 222 0.4234 MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTNSVNIPTPRKVDPVFKNDNYPQYTRKSKWFCCG* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4019 73 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 5 40 IPR008700 -
Mal5g4019 73 PANTHER RPM1-INTERACTING PROTEIN 4-LIKE 1 72 - -
Mal5g4019 73 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 72 IPR040387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4019 Mal-Chr5 109928413 109929837 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4019 - - gmx:100811925 129.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4019 5 109928413 109929837 Mal5g4019 5 109928413 109929837 ECH