Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3996 ATGGCACTCTTTCTTCTTCACGAAACCGCCGCTGGTTATGCCTTGTTTGAAGCCCATGGAATCGACGAAATCGGAATCGGGAACACTGAAGCTGTTCGGAACTCCGTTACCGATTTGAACCGCTTCGGTAAGGTTGTTAAGCTTCGCTCTTTCAACCCTTTTACCTCTGCTCTTGAAGGTCTCGAACAGATTAATGCTGTATCTGAAGGTATTATGACTGATGAGCTGAGGACTGTTTTGGAGACTAACTTACCTAAAGTAAAGGAAGGTAAGAAGCCAAAGTTCCAGTTAGGTGTAGCAGAATCTAAGATTGGTTCACATATACACGAAGCGACTAAAATTCCTGTCCAAAGTAATGAGTTTGTGTGCGAACTTATCCGTGGGATCAGACAACATTTTGAGAAGTTTGTTGGTGATCTCAAGCAAGGAGATTTGGAGAAGGCACAGCTTGGTCTTTGCCACAGTTACAGCAGAGCAAAGGTGAAATTCAATGTTAATCGGGTTGACAATATGGTCATTCAAGCAATCTTCCTTCTTGATACACTTGATAAGGATGTCAATTCATTTGCCATGAGAGTCAGGGAGTGGTATTCATGGCATTTTCCTGAACTTGTGAAGATTGTAAATGATAATTATCTGTATTGCAAAATTGCAAAATTTATTGAGGATAAGTCATTGTTGGCCGAAGACAAAATTGAAGCCTTAACTGACTTAGTTGGAGATGAAGATAAAGCAAAGGAGATTGTAGAAGCCGCCAAAGCCTCCATGGGACAAGATTTGTCCCCTATTGACTTGATCAATGTCCATCAGTTTGCACAAAGGGTGATGGACCTATCTGATTACAGGAGAAGATTGTCTGATTATCTAAGCACTAAAATGAATGATATTGCACCAAATTTGCAGTCTTTAGTTGGTGATAGTGTTGGTGCTCGTTTGATTTCCCATGCTGGTAGTCTCACAAATTTAGCTAAGTGTCCCTCTTCTACTCTTCAGATTCTTGGTGCAGAGAAGGCTTTGTTCAGGGCATTAAAAACAAGAGGAAACACTCCCAAATATGGGCTTATATTCCACTCTTCTTTTATTGGTCGAGCATCTGCCAAAAACAAAGGCCGAATGGCTCGCTATCTTGCAAACAAATGCTCAATTGCATCACGAATTGACTGCTTTTCCGAAAAGGGTACTTCAGCATTTGGAGAGAAACTTCGTGAGCAAGTTGAAGAGCGACTTGACTTTTATGATAAGGGAGTTGCCCCTCGTAAGAATATTGATGTCATGAAATCTGCTATTGAAAGTGCTGATAACAAAGATACAGAAATGGAAACCGAAGAAGTTTCAGCCAAGAAAACCAAGAAGAAGAAGCAAAAAACTCCTGCTGCAGAGGAAGGAGATGACATGGCTGTAGATAAGGCTGCAGAAATTACAAATGGTGATGCTGAGGATCAAAAGTCAGAAAAGAAGAAGAAAAAGAAAGAAAAGAGAAAGTTGGACCAGGAGGTTGAAGTTCAGGATAAGGCTGTAGACGATGGTGCCAATGGGGATTCAAGCAAGAAGAAGAAAAAGAAATCAAAAAAGAAGGATGCTGAATAA 1587 0.4071 MALFLLHETAAGYALFEAHGIDEIGIGNTEAVRNSVTDLNRFGKVVKLRSFNPFTSALEGLEQINAVSEGIMTDELRTVLETNLPKVKEGKKPKFQLGVAESKIGSHIHEATKIPVQSNEFVCELIRGIRQHFEKFVGDLKQGDLEKAQLGLCHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDVNSFAMRVREWYSWHFPELVKIVNDNYLYCKIAKFIEDKSLLAEDKIEALTDLVGDEDKAKEIVEAAKASMGQDLSPIDLINVHQFAQRVMDLSDYRRRLSDYLSTKMNDIAPNLQSLVGDSVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKGRMARYLANKCSIASRIDCFSEKGTSAFGEKLREQVEERLDFYDKGVAPRKNIDVMKSAIESADNKDTEMETEEVSAKKTKKKKQKTPAAEEGDDMAVDKAAEITNGDAEDQKSEKKKKKKEKRKLDQEVEVQDKAVDDGANGDSSKKKKKKSKKKDAE* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3996 528 MobiDBLite consensus disorder prediction 432 528 - -
Mal5g3996 528 PANTHER BNACNNG34340D PROTEIN 1 523 - -
Mal5g3996 528 Gene3D - 141 299 - -
Mal5g3996 528 SUPERFAMILY Nop domain 164 413 IPR036070 -
Mal5g3996 528 Pfam NOP5NT (NUC127) domain 4 70 IPR012974 -
Mal5g3996 528 Gene3D Nop domain 300 426 IPR042239 -
Mal5g3996 528 Pfam snoRNA binding domain, fibrillarin 178 410 IPR002687 -
Mal5g3996 528 ProSiteProfiles Nop domain profile. 296 414 IPR002687 -
Mal5g3996 528 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 523 IPR045056 GO:0030515|GO:0031428|GO:0032040
Mal5g3996 528 SMART NOSIC_2 171 223 IPR012976 -
Mal5g3996 528 Coils Coil 478 505 - -
Mal5g3996 528 MobiDBLite consensus disorder prediction 432 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3996 Mal-Chr5 109641858 109645130 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3996 K14564 - gmx:100815506 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3996 5 109641858 109645130 Mal5g3996 5 109641858 109645130 ECH