Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3943 ATGTTCACTGCTACCAAAGTAGCCTTTACTTTAACACCCCCTCGTCCATGTTCTGCACCCCCAACACCCTTCATTCCATTCTCTTTTTCTTCCGTTTCTCCTCCTCACCTCAATTCCCGCCACTTATGCCTTCGCCGCAGACTATTCCTACTTTCCCCTAAAGCAACTACAGATCAACAAGGGAATGTTGGAGATTTTGATGGGGATGCTGTTATTGATAGTAATGTCCTACCATATTGTAGCATAGATCAGAAAAAAGAGAAGAAATCCGTTGGTGAACTTGAGCAAGAATTTCTTCAAGCGCTCCAATCATTCTATTATGAGGGAAAGGCTATTATGTCAAATGAAGAATTTGATAATCTCAAGGAAGAACTTATGTGGGAAGGAAGCAGTGTTGTCATGCTAAGTTCGGATGAACAAAAATTTCTTGAAGCTTCTATGGCTTATGTATCGGGAAATCCAATTTTGACTGACAAAGAGTATGATAAATTGAAATTGAATCTAAAGAGGGAAGGGAGTGAAATTGTTGTTGAGGGTCCAAGGTGCAGCCTTCGAAGTAAAAAGGTTTATAGTGACCTGTCTGTTGACTATTTAAGGATGTTCCTGCTTAATGTCCCAGCCACTGTGGTTGCATTAGGATTGTTCTTCTTCCTTGATGATCTGACTGGATTTGAGATCACTTACTTGCTAGAGCTGCCAGAGCCTTTTAGTTTCATTTTCACTTGGTTTGCTGCTGTTCCCCTCATTGTATATCTAGCTCTATCACTAACAAGGGCCATCATAAAAGATTTTGTGATTTTAAAGGGTCCCTGTCCAAACTGTGGAACTGAAAATACCTCCTTCTTTGGGACAATACTGTCAATTTCAAGTGGTGGTTCCAGCAACAAAGTCAAATGCTCCGACTGTGGAACTGAAATGGTGTATGATTCAGCTACAAGATTGATTACATTGCCAGAATGA 960 0.4052 MFTATKVAFTLTPPRPCSAPPTPFIPFSFSSVSPPHLNSRHLCLRRRLFLLSPKATTDQQGNVGDFDGDAVIDSNVLPYCSIDQKKEKKSVGELEQEFLQALQSFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGNPILTDKEYDKLKLNLKREGSEIVVEGPRCSLRSKKVYSDLSVDYLRMFLLNVPATVVALGLFFFLDDLTGFEITYLLELPEPFSFIFTWFAAVPLIVYLALSLTRAIIKDFVILKGPCPNCGTENTSFFGTILSISSGGSSNKVKCSDCGTEMVYDSATRLITLPE* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3943 319 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 4 319 IPR039987 GO:0009535|GO:0009773|GO:0016730
Mal5g3943 319 PANTHER PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC 4 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3943 Mal-Chr5 108934775 108938443 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3943 - - gmx:100784314 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3943 5 108934775 108938443 Mal5g3943 5 108934775 108938443 ECH
Mal5g3943 5 108934775 108938443 Mal6g1656 6 30591528 30595183 PCT