Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3893 ATGGATTTGAAGCCTTCTCATGCTTCTCCAATTCTTACTGATCCTGTTCCTGTCAACAAGTCAAGGCTTGGATTGCATTCTAGCTTGTTAGCATATTCCCAACAAGATTCATCACTATCTCCAGGGAAGTATACAAAATCCAATTCAAAGAAAAATATGGGAAGTCTTGATGATGTTAGGTCTAATGGTTGGTTGGACGCTATGAAGGCATCTTCGCCTCCGAGGAAGAAATCGATACATAAAGGTTCGAACGCTCAGGTTGCTTCAATAGACTATGACATTGAAGATTATAATTTATGGATGCTGGGATATCCTTCAGCACTAGAAGCTTTTGAGAAAATCGCTGACCGTGCAAAGGATAAGAAGATTGCAATGTTTCTCGATTATGATGGCACACTTTCGCCTATAGTAGAGGATCCAGATTGTGCTTTTATGTCTGAACCTATGCGAACAGCGGTGAGAAGAGTGGCGGAGTATTTCCCTACCGCAATCATTAGCGGAAGAAGTCGCGACAAGGTTTTTGATTTAGTTAAACTGTCAGAACTCTACTATGCCGGTAGTCATGGGATGGACATTATTGGCCCTGTTAGTGACACCGTGTCCGCAAACCATCCAGATTGTGTTAAGTCTACTGACCATCAGGGAAAGGAGATAACTCTCTTTCAACCGGCAAAAGAATTCCTTCCTATGATTGATGAGGTTTTTAGAACCCTCATCGAGACTACCAAAGACATAGAAGGCGCAAAAGTTGAGAATCACAAGTTTTGCGTTTCTGTACATTACCGTAATGTAGAAGAGAATAATTGGACAGCGGTTGGCCAACGTGTCCATGATATCTTAAAAAGTTACCCTCGTTTACGTTCAACTCATGGACGGAAGGTTTTAGAAATTCATCCTGTAATTGAGTGGAACAAAGGAAAAGCTGTTGAATTTTTACTTGAATCGCTAGGTGCTACGGGAGAGCAATCGAGGTTATGGGATTTTGGTTTCATTAGTGAGAAAAGATAG 1008 0.4127 MDLKPSHASPILTDPVPVNKSRLGLHSSLLAYSQQDSSLSPGKYTKSNSKKNMGSLDDVRSNGWLDAMKASSPPRKKSIHKGSNAQVASIDYDIEDYNLWMLGYPSALEAFEKIADRAKDKKIAMFLDYDGTLSPIVEDPDCAFMSEPMRTAVRRVAEYFPTAIISGRSRDKVFDLVKLSELYYAGSHGMDIIGPVSDTVSANHPDCVKSTDHQGKEITLFQPAKEFLPMIDEVFRTLIETTKDIEGAKVENHKFCVSVHYRNVEENNWTAVGQRVHDILKSYPRLRSTHGRKVLEIHPVIEWNKGKAVEFLLESLGATGEQSRLWDFGFISEKR* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3893 335 Gene3D - 206 300 - -
Mal5g3893 335 SUPERFAMILY HAD-like 124 317 IPR036412 -
Mal5g3893 335 TIGRFAM T6PP: trehalose-phosphatase 121 320 IPR003337 GO:0003824|GO:0005992
Mal5g3893 335 MobiDBLite consensus disorder prediction 36 58 - -
Mal5g3893 335 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED 1 322 - -
Mal5g3893 335 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 322 IPR044651 GO:0004805|GO:0005992
Mal5g3893 335 Pfam Trehalose-phosphatase 126 323 IPR003337 GO:0003824|GO:0005992
Mal5g3893 335 Gene3D - 125 314 IPR023214 -
Mal5g3893 335 MobiDBLite consensus disorder prediction 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3893 Mal-Chr5 108011484 108025313 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3893 K01087 - tcc:18606311 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3893 5 108011484 108025313 Mal5g3893 5 108011484 108025313 ECH