Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3887 ATGGCTTCCAAAACTTGTTCCTCTCTTGCAATTTTCCTCACACTCAACATTCTCTTCTTTTCACTTGTCTCTTCTTGTGGGACTTGCGGCTCAGGTCCAAACCCAAACCCAAACCCGAAGCCAAAGCATAAGCCAAGCCCAAATCATTCAGGCGGTTCGGGCCATTCAGGTGGGTCTAGCCCCTATGGTGGCTCGACCCCTTCTGGAGGCTCAAGCCCCTCAGGTGGCTCTACCCCTTCAGGGGGTAGTGGGACCGGCTCATGCCCACGTGATGCACTCAAACTAGGCGTATGTGCCAATGTACTAAATGGATTGTTGAATGTAACTTTGGGTCAGCCACCAGTTACACCATGCTGCACCCTCCTAAATGGGCTTGTGGATCTTGAGGCTGCTGTGTGTCTTTGCACTGCCCTTAGAGCTAACATTTTGGGGATAAATCTCAACCTTCCTATCTCACTTAGTTTGCTTCTCAATGTTTGCTCAAGGCAAGCACCACGTGATTTCCAATGCTACTAA 516 0.4981 MASKTCSSLAIFLTLNILFFSLVSSCGTCGSGPNPNPNPKPKHKPSPNHSGGSGHSGGSSPYGGSTPSGGSSPSGGSTPSGGSGTGSCPRDALKLGVCANVLNGLLNVTLGQPPVTPCCTLLNGLVDLEAAVCLCTALRANILGINLNLPISLSLLLNVCSRQAPRDFQCY* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3887 171 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 90 170 IPR036312 -
Mal5g3887 171 MobiDBLite consensus disorder prediction 31 87 - -
Mal5g3887 171 Pfam Hydrophobic seed protein 88 170 IPR027923 -
Mal5g3887 171 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Mal5g3887 171 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 71 170 - -
Mal5g3887 171 Gene3D - 87 171 IPR036312 -
Mal5g3887 171 MobiDBLite consensus disorder prediction 49 85 - -
Mal5g3887 171 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 7 51 - -
Mal5g3887 171 CDD HPS_like 88 170 IPR027923 -
Mal5g3887 171 SMART aai_6 88 170 IPR016140 -
Mal5g3887 171 PANTHER - 71 170 - -
Mal5g3887 171 PANTHER - 7 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3887 Mal-Chr5 107854518 107855033 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3887 77 170 Acyl Lipid Metabolism Gene Families AT4G22490 42.553 7.03e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3887 - - gmx:100499716 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3887 5 107854518 107855033 Mal5g3887 5 107854518 107855033 ECH