Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3885 ATGGCTTCCAAAACTTGTTCCTCCCTAGCTATTTTCCTCACAATCAACCTCCTCTTTTTTTCACTTGTTTCAGCTTGTGGTTCCTATTCATGCAACCCTGCACCAAACCCAACCCCAAAGCCTAAGCCAAGGCCCAACCCAAATCCTAATCCAACCCCTTCAAGTGCTACATGCCCACGTGATGCTCTCAAACTTGGTGTATGTGCCAATGTCCTAAATGGGTTGTTGAATTTAACACTAGGTAAACCACCAGTGACCCCTTGTTGCTCACTCCTTGAAGGTCTTGTTGATCTTGAGGCTGCAGCATGCCTTTGCACTGCCCTTAGAGCTAACATTTTGGGCATTAATCTCAACCTTCCAATTTCACTTAGCTTGCTTCTCAATGTTTGCTCAAGGAAAGTCCCACGTGATTTCCAATGTGCCTAA 426 0.4531 MASKTCSSLAIFLTINLLFFSLVSACGSYSCNPAPNPTPKPKPRPNPNPNPTPSSATCPRDALKLGVCANVLNGLLNLTLGKPPVTPCCSLLEGLVDLEAAACLCTALRANILGINLNLPISLSLLLNVCSRKVPRDFQCA* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3885 141 SMART aai_6 58 140 IPR016140 -
Mal5g3885 141 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Mal5g3885 141 MobiDBLite consensus disorder prediction 36 57 - -
Mal5g3885 141 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 7 141 - -
Mal5g3885 141 Gene3D - 55 141 IPR036312 -
Mal5g3885 141 PANTHER - 7 141 - -
Mal5g3885 141 MobiDBLite consensus disorder prediction 36 54 - -
Mal5g3885 141 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 60 140 IPR036312 -
Mal5g3885 141 Pfam Hydrophobic seed protein 57 141 IPR027923 -
Mal5g3885 141 CDD HPS_like 56 140 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3885 Mal-Chr5 107828293 107828718 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3885 48 140 Acyl Lipid Metabolism Gene Families AT4G22490 38.710 9.35e-16 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3885 - - gmx:100801985 194.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3885 5 107828293 107828718 Mal5g3885 5 107828293 107828718 ECH