Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3884 ATGTTATCATCAAAATCAAAAGCTATGTTCTTCATCTTTAAGATATTGATGTTGAATGTTATAACACCAATGATACATGCATGTGGTCCATGCACTCAACCAAATCCACCACCTTACCACAAACCACCAAGCCATCCAAAACCAAAACATCCACCGCATCACGGCGGAGGAGGAGGACGGCCAATAATCGTCTCCCCTCCTCCGGTGGTTGTCGTGCCACCGATTATCATCACACCACCACTGCAACCACCTCCGACGATCATATATCCTCCACCAACAACCTCTCCTGTTTTTCCTCCTCCAATAACTCAAAGAACTTGTCCAATTGATGCACTCAAGCTTGGACTTTGTTTGGATGTGCTTAGAGGACTTGTTCATGTTGTAATTGGAAACCCTGTTGAGAATGTGTGTTGTCCTGTTATTCAAGGATTGGCTGATCTTGAAGCTGCAATTTGTCTTTGTACTGTTATTAGGGCTAAGGTTCTTAATCTTAATATTTTCCTTCCTCTTGCTCTTCAAGTTCTTATTACTTGTGGGAAGACTCCTCCTCCTGGTTTTGTTTGTCCACCTCTCTAA 576 0.4288 MLSSKSKAMFFIFKILMLNVITPMIHACGPCTQPNPPPYHKPPSHPKPKHPPHHGGGGGRPIIVSPPPVVVVPPIIITPPLQPPPTIIYPPPTTSPVFPPPITQRTCPIDALKLGLCLDVLRGLVHVVIGNPVENVCCPVIQGLADLEAAICLCTVIRAKVLNLNIFLPLALQVLITCGKTPPPGFVCPPL* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3884 191 Gene3D - 103 190 IPR036312 -
Mal5g3884 191 Pfam Hydrophobic seed protein 106 189 IPR027923 -
Mal5g3884 191 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 109 190 IPR036312 -
Mal5g3884 191 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 4 190 - -
Mal5g3884 191 MobiDBLite consensus disorder prediction 36 59 - -
Mal5g3884 191 SMART aai_6 107 188 IPR016140 -
Mal5g3884 191 CDD HPS_like 106 188 IPR027923 -
Mal5g3884 191 PANTHER - 4 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3884 Mal-Chr5 107815712 107816287 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3884 106 190 Acyl Lipid Metabolism Gene Families AT4G22490 35.294 2.39e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3884 - - gmx:100802510 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3884 5 107815712 107816287 Mal5g3884 5 107815712 107816287 ECH