Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3875 ATGGGAACTCGAACAAATTTCTACAAGAACCCTTCAATCTCCTACAACAGAAACTTAAGTCTCTCCTCCGTTCTTCAGAACCTCCATGCTTACAACATCGCCACCGGCAACGTTACTTCCGACGATCAACCGCCTCCCCCTCCCACCGCCTCCCTCAAACGTCGCCGCAATCCTCAACCACCGCAATCCCGTCACAATCACCGTAAGAAGAATGACGTTGACGATGATCCTTCCTCTATGTCCCACAGTGATTACATTCTAAAGAGAAGGAAAGAAGTTGATTCAGCTAAGAATTGTGACCGCATTGAATTAACTGAAGATGTCTTGGGAAACCCTAATTCTGCTCTCTCCTTGGTGGATTATGCAAGTGATGAAAGTGATTCTTCGGAATGTGAAGAAACTCGTACTCTTCCAAATTCTGGTCACAAAGAAGAATTTGATGGAGTCAAAAGCAGAAATGAGCAGCGTTTACCTGTATCTGGAGAACCTGTTTGTCTTATATGTGGAAGATATGGTGAATATATATGCAATGAGACAGATGATGATGTTTGTAGCATGGAGTGCAAAAAAGAACTTTTGGAAATTCTTAAACTCAATGAGGGATCCACCCATGACCAAGTTAAAGATTTCTCCTCATCTGGAATTAGTGATGCCTTACCAGCTCCTGTCTTTAGTGATGATACCTGGGATTATAATCGGCATCGCTGGTCAAAAAAGAGATCTAGTATTTGTACCTATGAATGTTGGAAATGTCAAAGACCTGGGCACTTAGCTGAAGATTGTCTAGTAAAGAGTTGCAGTGAGATAACAGTGGGAAGAAGTAATAGATCCAGTTCCATTCCAAAGGATCTTCTTGGGCTGTATAGAAGATGCCACCAGCTTGGTAAAGACTTGTTGGCTGCAAACTGTAATACATGCCGCAGCTCATTGAATTTGGCCACATGCATCGATTGTAGTATTGTTCTTTGTGATGGGGCAGGTCACTTGGATGATCATATAAGAACACACCCTTCCCATAAAAAATATTACTCACACAAGCTAAAACGTCTGGTTAAATGCTGCAAGTCAACTTGCAAGGTCACTGACATCAAGGATCTCTTGGTTTGTCACTATTGCTTTGATAAAGCCTTTGAAAAGTTCTATGACATGTATACTGCAACATGGAAAGGAGCCGGGTTTTCAATTATTTCGGGTTCTATATGCTGTGAAGACCACTTCACATGGCACCGGATGAATTGTTTGAATGCAGGTGCGGAAGAAAGTGCATATATTGTAAAAAGCAATGGCCACGAAGGCAAACACAGGCAACTTAGTGATTTCATTTTTTGA 1329 0.4184 MGTRTNFYKNPSISYNRNLSLSSVLQNLHAYNIATGNVTSDDQPPPPPTASLKRRRNPQPPQSRHNHRKKNDVDDDPSSMSHSDYILKRRKEVDSAKNCDRIELTEDVLGNPNSALSLVDYASDESDSSECEETRTLPNSGHKEEFDGVKSRNEQRLPVSGEPVCLICGRYGEYICNETDDDVCSMECKKELLEILKLNEGSTHDQVKDFSSSGISDALPAPVFSDDTWDYNRHRWSKKRSSICTYECWKCQRPGHLAEDCLVKSCSEITVGRSNRSSSIPKDLLGLYRRCHQLGKDLLAANCNTCRSSLNLATCIDCSIVLCDGAGHLDDHIRTHPSHKKYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFDKAFEKFYDMYTATWKGAGFSIISGSICCEDHFTWHRMNCLNAGAEESAYIVKSNGHEGKHRQLSDFIF* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3875 442 Gene3D - 146 202 - -
Mal5g3875 442 MobiDBLite consensus disorder prediction 65 89 - -
Mal5g3875 442 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 442 - -
Mal5g3875 442 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN ISOFORM 4 1 442 - -
Mal5g3875 442 Pfam HIT zinc finger 163 190 IPR007529 -
Mal5g3875 442 MobiDBLite consensus disorder prediction 35 89 - -
Mal5g3875 442 MobiDBLite consensus disorder prediction 123 154 - -
Mal5g3875 442 MobiDBLite consensus disorder prediction 128 152 - -
Mal5g3875 442 ProSiteProfiles Zinc finger CCHC-type profile. 248 261 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3875 Mal-Chr5 107713819 107722314 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3875 - - gmx:100814892 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3875 5 107713819 107722314 Mal5g3875 5 107713819 107722314 ECH