Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3814 ATGGTGGTTGCAACCGCAAACGCAGCGTTTACCTTCGCCGCAAACAAGCCCATGTTCATTTCACCGTCTTCATCACGAACCATAAGCCCAATTCGAGCCATCAAATCCTCGTTCAGAAACTCCATTTCCACCGATTTCGTCGCTCCTTCCTCCGCAATCAGTAGTTCCACCAGTCATTTCTCCGGTTACAAGCTCCGATCTCCGTGCTTCAATCCGGCGTCTGGTTCTACCGGTAAAAGAGGCGTCGTTACTATGGTTATTCCTTTCACAAAAGGCAGTGCCTTGGAGCAACCTCCACCAGACTTAGCTTCTTACTTGTACAAAAATCGAATTGTTTACTTGGGCATGTCTCTTGTTCCATCTGTTACAGAGTTGATGGTTGCTGAATTTCTTTACCTTCAATATGACGATGTAACCAAACCCATTTATCTGTATGTAAACTCCACCGGAACAACCAAGGGAGGTGAGAAGTTGGGTTATGAGACTGAAGCACTTGCAGTTTATGATATGATGAGGTACATCAAGCCTCCTATTTTTACTCTCTGTGTTGGCAACGCTTGGGGAGAGGCAGCCTTACTTTTGGCTGCTGGTGCAAAGGGTAACCGTTCTGCTTTGCCATCATCAACTATAATGATAAGACAGCCTATTGCAAAGTTTCAAGGTCAAGCAACAGATGTCAACCTTGCAAGAAAAGAAATCACTAGAGTGAAGACAGAATTGGTTAATTTGTTAGCAAAGCACACTGAAAAAACACCTGAGCAGATTGAAGCTGATATTCGGCGCCCAAAGTATTTTAGTCCAACTGAAGCTGTTGAGTATGGAATCATAGACAAGGTATTGTACAATGAGAGGGGCTCTAAGGATCGTGGCGTTTTTTCCGACCTTAAAAAGGCAAAGCTTATTTGA 906 0.4404 MVVATANAAFTFAANKPMFISPSSSRTISPIRAIKSSFRNSISTDFVAPSSAISSSTSHFSGYKLRSPCFNPASGSTGKRGVVTMVIPFTKGSALEQPPPDLASYLYKNRIVYLGMSLVPSVTELMVAEFLYLQYDDVTKPIYLYVNSTGTTKGGEKLGYETEALAVYDMMRYIKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIRQPIAKFQGQATDVNLARKEITRVKTELVNLLAKHTEKTPEQIEADIRRPKYFSPTEAVEYGIIDKVLYNERGSKDRGVFSDLKKAKLI* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3814 301 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 13 299 - -
Mal5g3814 301 SUPERFAMILY ClpP/crotonase 96 283 IPR029045 -
Mal5g3814 301 Coils Coil 226 246 - -
Mal5g3814 301 Gene3D - 74 287 - -
Mal5g3814 301 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 13 299 IPR023562 -
Mal5g3814 301 PRINTS Clp protease catalytic subunit P signature 101 116 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal5g3814 301 PRINTS Clp protease catalytic subunit P signature 201 220 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal5g3814 301 PRINTS Clp protease catalytic subunit P signature 258 277 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal5g3814 301 PRINTS Clp protease catalytic subunit P signature 180 197 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal5g3814 301 PRINTS Clp protease catalytic subunit P signature 141 161 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal5g3814 301 CDD S14_ClpP_2 101 279 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal5g3814 301 Pfam Clp protease 101 281 IPR023562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3814 Mal-Chr5 106764518 106769800 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3814 K01358 - gmx:100780029 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3814 5 106764518 106769800 Mal5g3814 5 106764518 106769800 ECH