Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3804 ATGGTGCTTCATTTTGCCAAATACATTCTATTCCAAAATCCCTTTCTCAAAAAGCTTTCACCTTTGCAAATCATTCTTCATGGGCACGTCAATTTCAACCAATTCAATCCATTTTCGCAGAAAATTTCATCTTTTTCTGAAAACTGTGAGAGACTTTCATGGGAACGTTCCACCCAAGAAATTCTATTGGGGAAGCTCAAATTTGCTTTGAGGAATCATCAATTGCAAGAAGCATTGGAAACTTTTCGTGATTTTCGAAACCTTTATGGCTACCCTGAGGTTAACCTATTGAATCAGCTTATTGTTATGTTGTGTTATTCTTCAAATCATGTTTTGGTGAGAAAAGCATTTGATTTGGTTTTGAAAATTGTTGATGAGAATTCAGGTTTGATTCATGTTGATACATTGACAAAACTTGCTTTGTCTTTGGCTAGAATGCAAATGTCGTCTCCTACGTCGGTTATACTTAGGTTGATGCTTAACAAAGGGTTTGTGCCATCTATGCAATTTTTGTCCTTGATTGTTTTTCATGTTGTGAAGACTGAAATTGGAACACATCTTGTATCTAATTATCTGTCTCAGGTTTGTGATTTTTATAATTGTTTGAAGGATAAAAAGGCGCGGAATGCAATCGCGTTGAAGCCGGATACTTTGGTGTTTAACCTTGTTCTTGATGCTTGTGTGAGGTTTAAGTTGTGTTTGAAAGGCTTGTGTCTGATTGAGTTAATGCCGCTAATGGGGACAGTGGCTGATGCACACTCGATTGTGATAATTTCGCAGATTTTAGAAATGAATGGTTTGAGAGATGAAATGATGGAATTGAAATGTCATATTGATGGAGTTTCAGCGTCTTATGTTCGACATTATCGCCAGTTCTATGATAGTTTGTTGAGCTTGCACTTTAAATTTAACGACATTGATGCTGCAGCTAAGCTTGTTTTGGATATAAATAGCTCGCATAATTGTCGCAGTAATGAAGAATATAGGAATCACTTACAAAAGCCTTGCTTTATCGCAATTGGATCGCCTAACCTTAAGAATGCATTAAAGATACATATAGAGCCTGAGCTACTGCAGAAGGACTCCGTGCTTAAATTGGAAGGTAGAGAAGGTCTTGTTTTTTATAAGGGTGGGAAACTTGCTCTTAGTAACAAAGCTTTGGCTAAGTTTATCATTGGTTACAAAAAAGATGGTAGAATTAGTAAACTTTCAAAACTTTTACTTAGCATTCAAGGGGAACTATACTCAGCGACAAGATCCAGGTTGTGTTCTGATGTGATCAGTGCTTGCATTCAGATGGGATGGCTTGAGTCTGCTCATGACATTTTGGACGACGCAGAGGCTGCCGGGTCTCCAATGGGTTGCGATACGTATATTTTACTCTTGTCAGCATATCAGAAGGAGGGAATGCAAAGAGAAGCTAAGACACTGCTAAAACAAATGAAAAAGATTGATTTGCAGCCAGAAATGTCTGATGATGCTACTGACGAACACATCCTTTGTCGAGAAACATCAAATTCAGTTGGTAAATCAGATTTGGCTGTCGCCTTGGCTCAAATATTGAAAGATGAAAATCAGACAGATATTCCTTTGGTGTATAACTTCAATTCTTCAATCTTCTTTTTCTGCAAGGTGAGAATGATAGAGGATGCACTGAGGGCATATAGAAGAATGTGCGAAATGAAAATTCAACCGACAAGTCAAACTTTTGCTCATCTCGTGTGTGGATATTCTTCTCTCAGTATGTACCGTGAGATTACATACTTGTGGGGAGACATTAAGAGATTCATGAGGAACGGCTATTTAGTTGTGAATAAAGATCTATATGAGTTACTGCTGCTGAACTTCATTCAAGGTGGTTACTTTGAGAGAGTGATGGAGGTCATTGGCCATATGAATGACCATAACATGTATACTGACAAGTTGATGTACAAAAGTGAGTTCCTTAGACTTCACAAGAATCTTTATAGAAGTTTAAAAGCGTCAGATACAAGAACAGAAGCACAAAGCAAAAGGCTTGAGCATGTTCAGGAATTTAGGAAATGGGCTGGTATTGATTAA 2061 0.3765 MVLHFAKYILFQNPFLKKLSPLQIILHGHVNFNQFNPFSQKISSFSENCERLSWERSTQEILLGKLKFALRNHQLQEALETFRDFRNLYGYPEVNLLNQLIVMLCYSSNHVLVRKAFDLVLKIVDENSGLIHVDTLTKLALSLARMQMSSPTSVILRLMLNKGFVPSMQFLSLIVFHVVKTEIGTHLVSNYLSQVCDFYNCLKDKKARNAIALKPDTLVFNLVLDACVRFKLCLKGLCLIELMPLMGTVADAHSIVIISQILEMNGLRDEMMELKCHIDGVSASYVRHYRQFYDSLLSLHFKFNDIDAAAKLVLDINSSHNCRSNEEYRNHLQKPCFIAIGSPNLKNALKIHIEPELLQKDSVLKLEGREGLVFYKGGKLALSNKALAKFIIGYKKDGRISKLSKLLLSIQGELYSATRSRLCSDVISACIQMGWLESAHDILDDAEAAGSPMGCDTYILLLSAYQKEGMQREAKTLLKQMKKIDLQPEMSDDATDEHILCRETSNSVGKSDLAVALAQILKDENQTDIPLVYNFNSSIFFFCKVRMIEDALRAYRRMCEMKIQPTSQTFAHLVCGYSSLSMYREITYLWGDIKRFMRNGYLVVNKDLYELLLLNFIQGGYFERVMEVIGHMNDHNMYTDKLMYKSEFLRLHKNLYRSLKASDTRTEAQSKRLEHVQEFRKWAGID* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3804 686 TIGRFAM PPR: pentatricopeptide repeat domain 542 566 IPR002885 -
Mal5g3804 686 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 531 565 IPR002885 -
Mal5g3804 686 Gene3D Tetratricopeptide repeat domain 59 339 IPR011990 GO:0005515
Mal5g3804 686 PANTHER OS07G0495300 PROTEIN 19 686 - -
Mal5g3804 686 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 454 488 IPR002885 -
Mal5g3804 686 Gene3D Tetratricopeptide repeat domain 500 684 IPR011990 GO:0005515
Mal5g3804 686 PANTHER BNAC05G43320D PROTEIN 19 686 - -
Mal5g3804 686 Gene3D Tetratricopeptide repeat domain 374 499 IPR011990 GO:0005515
Mal5g3804 686 Coils Coil 467 487 - -
Mal5g3804 686 Pfam PPR repeat 457 484 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3804 Mal-Chr5 106596069 106598129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3804 215 644 Glycosyltransferase AT1G05670 22.222 4.66e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3804 - - cam:101501642 1118.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3804 5 106596069 106598129 Mal5g3804 5 106596069 106598129 ECH