Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3801 ATGTACAAAGGTCGTGGTGGTTCTGCCTCCAAATCGGAGGATCGAAAGCGAATCAACGATGTTCTCGATAAGCAACTCGAACGTTCCTCTCCTTCAACTTCTCGTCCCATCAATGGCAAAACCAACAAAGAGTCTATCAAGGATCCTCTCCTTCAACGATCCTCCAAAACTTCCAATATCTCTGAGGAGTCTGAAACAGACAGTGAAGAGTCGGATGTGAGTGGTTCTGATGGAGAGGACACATCTTGGATTTCATGGTTCTGCAATCTCAGAGGAAATGAGTTCTTTTGTGAGGTTGATGATGATTACATCCAAGATGACTTCAACCTTTGTGGATTGAGCAGCCAAGTGCCTTACTATGATTATGCTCTTGATTTGATTTTGGATGTTGAATCCTCCCATGGTGATATGTTCACAGAGGAACAAAACGAGTTAATTGAATCGGCAGCAGAGATGCTCTATGGTATGATTCATGCGCGATACATATTGACAAGCAAAGGAATGGCTGCCATGCTTGACAAGTACAAGAACTATGACTTTGGTAGATGCCCAAGGGTTTACTGCTCTGGACAACCCTGTCTTCCAGTTGGTCAGTCGGACATTCCTAGGTCAAGTACTGTGAAAATATATTGCCCTAGGTGCGAAGATCTTTATTATCCTCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACAACATTCCCACACCTCTTCTTGATGACATATGGACAACTGAAGCCGCAGAAACCAGCTCAGGGCTATGTTCCAAGAGTTTTTGGGTTCAAACTTCACAAGCCATGA 810 0.437 MYKGRGGSASKSEDRKRINDVLDKQLERSSPSTSRPINGKTNKESIKDPLLQRSSKTSNISEESETDSEESDVSGSDGEDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGMIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPAQGYVPRVFGFKLHKP* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3801 269 MobiDBLite consensus disorder prediction 1 78 - -
Mal5g3801 269 PRINTS Casein kinase II regulatory subunit family signature 179 200 IPR000704 GO:0005956|GO:0019887
Mal5g3801 269 PRINTS Casein kinase II regulatory subunit family signature 201 222 IPR000704 GO:0005956|GO:0019887
Mal5g3801 269 PRINTS Casein kinase II regulatory subunit family signature 82 98 IPR000704 GO:0005956|GO:0019887
Mal5g3801 269 PRINTS Casein kinase II regulatory subunit family signature 229 246 IPR000704 GO:0005956|GO:0019887
Mal5g3801 269 PRINTS Casein kinase II regulatory subunit family signature 154 175 IPR000704 GO:0005956|GO:0019887
Mal5g3801 269 PRINTS Casein kinase II regulatory subunit family signature 99 113 IPR000704 GO:0005956|GO:0019887
Mal5g3801 269 SUPERFAMILY Casein kinase II beta subunit 80 268 IPR035991 GO:0005956|GO:0019887
Mal5g3801 269 MobiDBLite consensus disorder prediction 8 24 - -
Mal5g3801 269 Gene3D - 180 254 - -
Mal5g3801 269 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 75 179 IPR016149 GO:0005956|GO:0019887
Mal5g3801 269 SMART CK_II_beta_2 82 265 IPR000704 GO:0005956|GO:0019887
Mal5g3801 269 MobiDBLite consensus disorder prediction 25 40 - -
Mal5g3801 269 ProSitePatterns Casein kinase II regulatory subunit signature. 183 214 IPR000704 GO:0005956|GO:0019887
Mal5g3801 269 PANTHER CASEIN KINASE II SUBUNIT BETA-2 1 268 - -
Mal5g3801 269 Pfam Casein kinase II regulatory subunit 82 265 IPR000704 GO:0005956|GO:0019887
Mal5g3801 269 PANTHER CASEIN KINASE II SUBUNIT BETA 1 268 IPR000704 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3801 Mal-Chr5 106573093 106576442 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3801 K03115 - gmx:100784848 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3801 5 106573093 106576442 Mal5g3801 5 106573093 106576442 ECH
Mal6g1504 6 27995069 27998590 Mal5g3801 5 106573093 106576442 PCT