Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3787 ATGGCCGAATCGGTGGAGCTTCCAACTCGCATAGCGATCCTTCCTTTCAGAAACAAAGTCCTCTTACCCGGCGCCATCATCAGAATCCGTTGCACTTCACCTAGCAGTGTGAAGTTGGTGGAACAAGAACTTTGGCAGAAAGAAGAGAAGGGGTTGATTGGCATCCTGCCCGTGCATGATGCTCTTGAAATTAAGCCTGCAAGTCCTACTGCATCTCAAGGTGCAGGAACTGATATTCTAGACCAAAGCTCAAAACTTCAGGATGGTTCACCAGATTCTATCAAGTCTGATACCAAAAAGCAGAATGACATTGTTCATTGGCACAACAGGGGGGTTGCTGCTCGACCATTACATTTATCAAGGGGAGTAGAGAAACCAAGTGGGAGGGTCACATATACAGTCGTTCTTGAAGGTTTGTGCAGATTTAGTGTTTTGGAACTAAGCACAAGAGGAATATACCATACTGCAAAGATATCTTCCCTTGAGATGACTAAGATTGAGATGGAACAATTAGAGCAAGACCCAGATTACATAACGTTGTCTCGCCAATTCAAAGCAACAGCAACGGAGCTTATTTCTGTTCTAGAGCTGAAACAAAAAACCGGTGGAAGAACCAAAGTCCTTTTGGATAACATTCCTGTTCATAAGTTGGCTGATATATTTGTTGCAAGTTTTGAGATAAGTTTTGAAGAACAACTATCTATGTTGGATTCAGTTGGCCCTAAATTGAGGCTTTCAAAAGCAACCGAGTTAGTTGACAGGCATTTACAGTCAATACGTGTAGCTGAGAAAATTACGCAGAAGGTTGAAGGCCAATTGTCAAAATCTCAAAAAGAATTTCTTCTGCGTCAGCAGATGAGGGCTATAAAAGAAGAACTTGGTGATAACGAGGATGATGAGGATGACCTGGTTGCCCTTGAAAGAAAGATGCAGAGTGCCGGAATGCCACAAAATGTATGGAAACATGCACAAAGAGAGTTGAGGAGGCTTAAAAAAATGCAGCCTCAGCAACCTGGCTATAACAGTTCGCGGGTTTACCTAGATCTTCTTGCTGATCTTCCCTGGCAGAAGGCCAGTGAAGAGATTGAGCTGGACTTAAGAGCTGCACAAAAGCGACTGGACAGTGATCACTATGGTTTAGTGAAGGTCAAGCAACGGATTATTGAATACCTGGCAGTTCGCAAGCTTAAACCAGATGCAAGGGGTCCGGTATTGTGCTTTGTTGGACCACCAGGTGTTGGGAAAACATCATTGGCATCTTCTATTGCTGCTGCTTTGGGAAGAAAATTTATCCGCATATCACTTGGTGGAGTCAAGGATGAAGCTGATATTAGAGGACATAGGAGAACCTATGTTGGAAGCATGCCTGGGCGACTTATAGATGGACTAAAGAGAGTAGCTGTTTGCAATCCTGTTATGTTGCTTGATGAAGTTGACAAGACAGGTTCTGATGTTCGTGGAGATCCAGCTTCAGCATTGCTAGAGGTTCTTGATCCAGAACAAAATAAAACATTCAATGATCACTATTTGAATGTTCCATTTGATCTGTCCAAGGTAATTTTTGTGGCTACAGCAAATAGGATGCAGCCTATTTCTGCACCGCTTCTGGATAGGATGGAAGTAATCGAGCTTCCTGGATATACACCTGAAGAAAAGCTCCAAATAGCCATGCAACATTTGATTCCAAGAGTTTTGGACCAACATGGGTTGAGTTCTGAGTTTATTCAGATTCCAGAGGCGATGGTGAAACTCGTCATTCAGAGATATACCAGGGAAGCTGGTGTGCGGAATTTGGAGAGGAACCTTGCTGCCTTGGCTCGTGCTGCTGCAGTAAGAGTTGTAGAGCAAGAACAGGTGGTTCCATTAACCAAAGGGATGCAAGGACTTTCTACCCTTTCTACCCCACTTCTGGAAAATAGACTCGCTGATGGAACTGAAGTTGAAATGGATGTGATGCCAATGAGTGTAAATAGTCGTGACATCTCAAACACATTCAGGATCGCCTCTCCGTTGGTTGTTGATGAAACCATGCTTGAAAAAGTTCTTGGGCCTCCAAGATTTGATGATGGTGAAGCTGCAGAACGTGTGGCTTCCCCTGGGGTCTCTGTTGGGCTGGTTTGGACTGCTTTTGGTGGAGAAGTTCAGTTTGTGGAGGCTACAGAAATGGTAGGGAAGGGTGAACTGCATCTCACTGGACAACTTGGTGATGTAATCAAAGAATCAGCTCAGATTGCACTAACATGGGTAAGGGCAAGGGCAACTGATCTTAGGCTGAATGCTGCAAAGGGATTTAATCTTTTGGAGGGGCGTGATATACATATTCATTTTCCCGCGGGTGCTGTTCCTAAAGATGGGCCCTCAGCAGGTGTAACTTTAGTCACATCATTGGTATCACTTTTCACTCAGAAAAGCGTGAGATCAGATACAGCTATGACTGGAGAGATGACATTGAGGGGACTAGTTCTACCTGTTGGAGGTGTTAAGGATAAGATATTAGCTGCCCATCGGTATGGTATCAAGAGAGTTATCCTGCCTGAAAGGAACCTGAAAGACTTGGTTGAAGTACCATCATCAGTGCTGGCCAATTTGGAGATACTGCTTGCAAAAAGAATGGAAGATGTATTAGAGCATGCTTTTGATGGTGGGTGCCCATGGAGACAACACTCTAAGTTATAG 2676 0.4402 MAESVELPTRIAILPFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQKEEKGLIGILPVHDALEIKPASPTASQGAGTDILDQSSKLQDGSPDSIKSDTKKQNDIVHWHNRGVAARPLHLSRGVEKPSGRVTYTVVLEGLCRFSVLELSTRGIYHTAKISSLEMTKIEMEQLEQDPDYITLSRQFKATATELISVLELKQKTGGRTKVLLDNIPVHKLADIFVASFEISFEEQLSMLDSVGPKLRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNEDDEDDLVALERKMQSAGMPQNVWKHAQRELRRLKKMQPQQPGYNSSRVYLDLLADLPWQKASEEIELDLRAAQKRLDSDHYGLVKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALGRKFIRISLGGVKDEADIRGHRRTYVGSMPGRLIDGLKRVAVCNPVMLLDEVDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRMQPISAPLLDRMEVIELPGYTPEEKLQIAMQHLIPRVLDQHGLSSEFIQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVRVVEQEQVVPLTKGMQGLSTLSTPLLENRLADGTEVEMDVMPMSVNSRDISNTFRIASPLVVDETMLEKVLGPPRFDDGEAAERVASPGVSVGLVWTAFGGEVQFVEATEMVGKGELHLTGQLGDVIKESAQIALTWVRARATDLRLNAAKGFNLLEGRDIHIHFPAGAVPKDGPSAGVTLVTSLVSLFTQKSVRSDTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPSSVLANLEILLAKRMEDVLEHAFDGGCPWRQHSKL* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3787 891 Pfam ATPase family associated with various cellular activities (AAA) 405 542 IPR003959 GO:0005524|GO:0016887
Mal5g3787 891 PIRSF Lon_proteas 657 882 IPR004815 GO:0004176|GO:0005524|GO:0006508
Mal5g3787 891 PIRSF Lon_proteas 1 628 IPR004815 GO:0004176|GO:0005524|GO:0006508
Mal5g3787 891 MobiDBLite consensus disorder prediction 70 91 - -
Mal5g3787 891 ProSiteProfiles Lon proteolytic domain profile. 696 881 IPR008269 GO:0004176|GO:0004252|GO:0006508
Mal5g3787 891 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 1 891 - -
Mal5g3787 891 SMART AAA_5 401 546 IPR003593 -
Mal5g3787 891 Gene3D - 545 636 - -
Mal5g3787 891 SUPERFAMILY PUA domain-like 10 253 IPR015947 -
Mal5g3787 891 SMART lon_5 10 254 IPR003111 -
Mal5g3787 891 Coils Coil 289 309 - -
Mal5g3787 891 ProSitePatterns ATP-dependent serine proteases, lon family, serine active site. 784 792 IPR008268 GO:0004176|GO:0004252|GO:0006508
Mal5g3787 891 Pfam ATP-dependent protease La (LON) substrate-binding domain 11 254 IPR003111 -
Mal5g3787 891 Gene3D - 305 353 - -
Mal5g3787 891 Gene3D - 698 883 IPR014721 -
Mal5g3787 891 SUPERFAMILY Ribosomal protein S5 domain 2-like 699 879 IPR020568 -
Mal5g3787 891 Gene3D - 366 544 IPR027417 -
Mal5g3787 891 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 409 428 - -
Mal5g3787 891 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 781 800 - -
Mal5g3787 891 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 834 852 - -
Mal5g3787 891 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 699 715 - -
Mal5g3787 891 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 811 830 - -
Mal5g3787 891 Pfam Lon protease (S16) C-terminal proteolytic domain 673 879 IPR008269 GO:0004176|GO:0004252|GO:0006508
Mal5g3787 891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 620 IPR027417 -
Mal5g3787 891 Gene3D - 163 297 - -
Mal5g3787 891 MobiDBLite consensus disorder prediction 67 101 - -
Mal5g3787 891 ProSiteProfiles Lon N-terminal domain profile. 11 254 IPR003111 -
Mal5g3787 891 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 1 891 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Mal5g3787 891 Hamap Lon protease homolog 2, peroxisomal [LONP2]. 3 891 IPR027501 GO:0004252|GO:0006515
Mal5g3787 891 Gene3D - 1 162 IPR046336 -
Mal5g3787 891 TIGRFAM lon: endopeptidase La 13 879 IPR004815 GO:0004176|GO:0005524|GO:0006508
Mal5g3787 891 CDD AAA 386 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3787 Mal-Chr5 106343986 106356160 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3787 K01338 - gmx:100789982 1555.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3787 5 106343986 106356160 Mal5g3787 5 106343986 106356160 ECH