Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3766 ATGGCCACATCTCTTTCTTCTGCAATCCACATCTCATTTCTTGACACCAAAACAACACGAACAAGGTTCAAAACTCCTCCTATTACAACTCTCAAAACTCACAGAAGGTTTCTCACCGTTTCTTCAAAATCCATTCCAGATTCTGAAACCACCCCACCAAACAACAACAAAAAAAAATCATCTTTATCCGACCAACTCGCTTCTCTTGCGAATACAACGTTATCCACTGTCCCAGAAGACCAACCAAAAGTGTTTTCAAAGCCAAAACCTACATGGGTCAATCCCACTAAGACTAAGCGTCCTCTTTTGTCTCATGAAAGACACAAACGTTCTTCTGTTTTGTATAATCCACAGTTAAGGGAGTTTCAACGGTTTGCTCAGAGATTGAATAACTGTGATGTCTCTTCTGAAGAAGAATTTATGGCTATTTTGGAAGAAATTCCGAGTTCACTTACGAGGGAAAATGCTCTCTTGGTGCTTAATAGTTTGAAGCCATGGCAGAAGACTCATATGTTTTTTAATTGGATTAAGACCCAGAATTTGCTTCCTATGGAAACTATATTCTACAATGTTACAATGAAGTCTTTGAGATTTGGGAGACAATTTGGGATTATAGAAGAGCTTGCACACCAGATGATTGATAGTGGGGTTGAGTTGGATAACATTACTTATTCAACTATTATAACTTGTGCTAAGAAGTGTAATCTTTTTGACAAAGCTGTGCATTGGTTCGAGAGGATGTACAAGACTGGTTTGATGCCGGATGAGGTAACTTTCTCAGCTATTTTAGATATTTATGCTAGGTTAGGTAAGGTTGAAGAGGTTGTTAGTTTGTTTGAGAGAGGGAGAGCAACTGGGTGGAAGCCTGATCCAATCACATTTTCTGTGTTGGGGAAGATGTTTGGGGAGGCTGGGGATTATGATGGTATTAGGTATGTTTTGCAAGAGATGAAATCTTTAGGAGTGCAGCCTAATGTAGTTGTGTACAATACCTTGTTGGAAGCAATGGGAAAGGTTGGGAAGCCAGGGTTTGCAAGGATTTTGTTCAAAGAAATGATTGACTTGGGGATTGCCCCAAATGAGAAGACTCTAACAGCGGTTATTAAGATATATGGAAAGGCTAGGTGGTCTAAAGATGCTTTGGAATTGTGGAAAATGATGAAGGAGAACGGTTGGCCTATGGATTTTATATTGTATAATTCATTGTTGAATATGTGTGCAGATGTTGGATTACTTAAAGAAGCCGAAACTCTGTTCAAGGATATGAAACAATCTGAGCATTGCAAGCCAGATAGTTGGAGTTACACGGCTATGCTAAACATATATGGGAGTGAAGGAGATGTGCATAAGGCAATGAAGTTGTTTGAAGATATGTCTAAGCTTGGTATTGAACTCAATGTGATGGGGTGCACTTGCTTGATTCAGTGTTTGGGAAAGGCCATGGAAATTGATGATTTGGTCAGAGTTTTTGACATTTCAGTTGAGAGAGGAGTTAAGCCAGATGATAGGCTATGTGGTTGCTTGCTATCTGTTGTGTCTCTTTCTCAGGGTAGCAAGGATCAGGAAAAAGTCCTTGCTTGTTTGCAACGAGCTAACCCAAAATTGGTTGCCTTCATTGAACTAATTGTAGATGAGGAAACTAGTTTTGAAACTGTCAAAGAAGAGTTTAAGGGTATCATGAGTAATGCAGTGGTTGAGGTGAGAAGACCCTTCTGTAACTGCTTGATTGACATATGTAGAAACAAAGATCTCCTAGAGAGAGCTCACGAGTTGCTCTACCTAGGGACTTTATATGGATTCTACCCAAGTTTGCACAACAAAACACAATATGAATGGTGTTTAGATGTTCGAACATTGTCAGTTGGGGCAGCTCTAACTGCACTTGAAGAGTGGATGACTACACTCACCAAAATTGTGAAGCGAGAGGAGGCATTACCAGACTTATTTCTAGCACAAACAGGTACCGGTGCCCATAAGTTTGCACAAGGACTCAATATTTCTTTTGCATCTCATTTGAGAAAGTTGGATGCTCCATTTTGGCAGAGCAAAGATAAAGTTGGTTGTTTTATTGCAACAAAAGAGGATTTAGTCTCTTGGGTGCAATCAAACTTTCCGTCCGCATCTATTGCAACATAA 2136 0.3975 MATSLSSAIHISFLDTKTTRTRFKTPPITTLKTHRRFLTVSSKSIPDSETTPPNNNKKKSSLSDQLASLANTTLSTVPEDQPKVFSKPKPTWVNPTKTKRPLLSHERHKRSSVLYNPQLREFQRFAQRLNNCDVSSEEEFMAILEEIPSSLTRENALLVLNSLKPWQKTHMFFNWIKTQNLLPMETIFYNVTMKSLRFGRQFGIIEELAHQMIDSGVELDNITYSTIITCAKKCNLFDKAVHWFERMYKTGLMPDEVTFSAILDIYARLGKVEEVVSLFERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNVVVYNTLLEAMGKVGKPGFARILFKEMIDLGIAPNEKTLTAVIKIYGKARWSKDALELWKMMKENGWPMDFILYNSLLNMCADVGLLKEAETLFKDMKQSEHCKPDSWSYTAMLNIYGSEGDVHKAMKLFEDMSKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFDISVERGVKPDDRLCGCLLSVVSLSQGSKDQEKVLACLQRANPKLVAFIELIVDEETSFETVKEEFKGIMSNAVVEVRRPFCNCLIDICRNKDLLERAHELLYLGTLYGFYPSLHNKTQYEWCLDVRTLSVGAALTALEEWMTTLTKIVKREEALPDLFLAQTGTGAHKFAQGLNISFASHLRKLDAPFWQSKDKVGCFIATKEDLVSWVQSNFPSASIAT* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3766 711 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 360 394 IPR002885 -
Mal5g3766 711 PANTHER OS03G0856100 PROTEIN 28 704 - -
Mal5g3766 711 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 431 465 IPR002885 -
Mal5g3766 711 MobiDBLite consensus disorder prediction 36 64 - -
Mal5g3766 711 SUPERFAMILY HCP-like 237 464 - -
Mal5g3766 711 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 255 289 IPR002885 -
Mal5g3766 711 SMART SMR_2 611 694 IPR002625 -
Mal5g3766 711 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 325 359 IPR002885 -
Mal5g3766 711 Pfam Pentatricopeptide repeat domain 313 373 IPR002885 -
Mal5g3766 711 Pfam Pentatricopeptide repeat domain 208 266 IPR002885 -
Mal5g3766 711 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 395 429 IPR002885 -
Mal5g3766 711 TIGRFAM PPR: pentatricopeptide repeat domain 363 395 IPR002885 -
Mal5g3766 711 TIGRFAM PPR: pentatricopeptide repeat domain 257 290 IPR002885 -
Mal5g3766 711 TIGRFAM PPR: pentatricopeptide repeat domain 327 361 IPR002885 -
Mal5g3766 711 TIGRFAM PPR: pentatricopeptide repeat domain 222 256 IPR002885 -
Mal5g3766 711 TIGRFAM PPR: pentatricopeptide repeat domain 299 326 IPR002885 -
Mal5g3766 711 TIGRFAM PPR: pentatricopeptide repeat domain 434 467 IPR002885 -
Mal5g3766 711 TIGRFAM PPR: pentatricopeptide repeat domain 398 431 IPR002885 -
Mal5g3766 711 TIGRFAM PPR: pentatricopeptide repeat domain 470 501 IPR002885 -
Mal5g3766 711 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 290 324 IPR002885 -
Mal5g3766 711 MobiDBLite consensus disorder prediction 77 107 - -
Mal5g3766 711 PANTHER OS03G0856100 PROTEIN 28 704 - -
Mal5g3766 711 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 220 254 IPR002885 -
Mal5g3766 711 Pfam PPR repeat family 430 477 IPR002885 -
Mal5g3766 711 Gene3D Tetratricopeptide repeat domain 125 264 IPR011990 GO:0005515
Mal5g3766 711 Gene3D Tetratricopeptide repeat domain 265 374 IPR011990 GO:0005515
Mal5g3766 711 Gene3D Tetratricopeptide repeat domain 378 567 IPR011990 GO:0005515
Mal5g3766 711 Pfam PPR repeat 398 425 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3766 Mal-Chr5 105812519 105814654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3766 189 525 Glycosyltransferase AT1G05670 25.294 3.59e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3766 - - gmx:100780994 1125.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3766 5 105812519 105814654 Mal5g3766 5 105812519 105814654 ECH