Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3498 ATGCTCGCACATACACCAAATGGCACCCTCTTACTGCGTGAAGGAGAACAAAGAATGTGTAAATTAAAATGGGTTGAGACATACTTCAAAGACTGTCTTTGCAATTTGAGAGATGACATATCATTCAGTTTGGGACTCATGAGTTTAGTATCATGGGGAGTTGCTGAAATTCCTCAGATAATCACCATTTTTCGCAACAAGTCAAGCCATGGAATTTCCTTTGCCTTCCTCCTTACTTGGGTCGCTGGAGACATATGCAACTTGGTGGGTTGCCTCCTGGAACCAGCTACTTTGCCTACACAGTTTTACACAGCTCTGCTTTATGCAACCACTACAATCATATTACTACTACAAATAGTATACTATGATCACATCCTCAAATGGTGCAAACGTCGTCAGATCAAGATCAAGGTTAACAACAAACAGGATAATGAAGAAGAGAAAAAACCCTTGAAACCAAAACCAAGTCACGAGTCTGGAATTGCAATACCCAGTGGCACACCCAAAGCAGCAGCTCAAGGGGAGTATTACTATATGTCAGCAAGATCATTAGCAGGGAGTGCTACTCCACCCTCATTTACTTACCTAAGAGCTGCCAAAAGTGGTCCTTCAGCCTTGGAATTCACCCATGATTCTTCCTCTGATGATGAAGCATCTCAAGTTACGTCTAACATCTCTACAACCAAACCTTGGTCCATACCACGTTCTGTAGATGGACGTTATGGAACATTTCTAGCTACAGCCATTAACTTACCCTCGAAGGGTAATGCTATGAGATATGGATACATAGGACTTACTGGAATAAAGATATTTCAGGAGAATGAGATACATAGTACATATGGACAATATTTGGGATGGATCATGGCTGCTATCTATACATGTAGTCGCATTCCACAAATATGGTTGAATATTAAAAGAGGTAGTGTAGAGGGCTTAAATCCTTTCATGTTCGTCTTTGCACTGATTGCTAATGCCTCTTATGTGGGAAGTATTCTTGTACGAACTACAGAATTTGAAAGCATCAAAGCTAATATGCCATGGTTGTTGGATGCCACACTTTGCGTGGCACTAGACATTTTTATAATATCACAGTACATTTATTATAGATACTTTCGCAGCAGAGAAGAAGCAAGTGATGATGGAGAAAACTTGAAGTAG 1158 0.4041 MLAHTPNGTLLLREGEQRMCKLKWVETYFKDCLCNLRDDISFSLGLMSLVSWGVAEIPQIITIFRNKSSHGISFAFLLTWVAGDICNLVGCLLEPATLPTQFYTALLYATTTIILLLQIVYYDHILKWCKRRQIKIKVNNKQDNEEEKKPLKPKPSHESGIAIPSGTPKAAAQGEYYYMSARSLAGSATPPSFTYLRAAKSGPSALEFTHDSSSDDEASQVTSNISTTKPWSIPRSVDGRYGTFLATAINLPSKGNAMRYGYIGLTGIKIFQENEIHSTYGQYLGWIMAAIYTCSRIPQIWLNIKRGSVEGLNPFMFVFALIANASYVGSILVRTTEFESIKANMPWLLDATLCVALDIFIISQYIYYRYFRSREEASDDGENLK* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3498 385 PANTHER PQ-LOOP PROTEIN/TRANSMEMBRANE FAMILY PROTEIN 17 382 - -
Mal5g3498 385 Pfam PQ loop repeat 40 96 IPR006603 -
Mal5g3498 385 Pfam PQ loop repeat 281 336 IPR006603 -
Mal5g3498 385 Gene3D - 281 382 - -
Mal5g3498 385 MobiDBLite consensus disorder prediction 141 155 - -
Mal5g3498 385 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 17 382 - -
Mal5g3498 385 SMART ctns 294 325 IPR006603 -
Mal5g3498 385 SMART ctns 54 85 IPR006603 -
Mal5g3498 385 Gene3D - 37 125 - -
Mal5g3498 385 MobiDBLite consensus disorder prediction 207 227 - -
Mal5g3498 385 MobiDBLite consensus disorder prediction 141 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3498 Mal-Chr5 100439229 100444471 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3498 K23678 - gmx:100789634 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3498 5 100439229 100444471 Mal5g3498 5 100439229 100444471 ECH
Mal7g1375 7 43109111 43114769 Mal5g3498 5 100439229 100444471 PCT