Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3494 ATGAGATTCTTAATATTAATCTTATGTATTCTCATTCTCTTATCCACAAATACCTTATGCACCACCACCACCCTTGAGCAAGATTTCAAGGAAGCACCAAAATTCTACAACTCCCCAATATGCACAACCATTGAATCGAATAACCACACATGTTCAATCTCAGCCGTACACGTTGCAATGACACTCGACGTGTCATACATCCGTGGCTCAATGGCAGCAATCCTCTCCATACTCCAACACTCCTCATGTCCGGAAAACATTGTTTTCCATTTCATCACATCTGCTTCCGTATCCATTCTGAACCGAACAATAACTAACTCATTCCCCTATCTAAAATACCAAATATACCCTTTCAACGACGCTCCTGTCGCCGGATTAATCTCCACCTCCATCCGCTCCGCCCTTGATACTCCGCTCAACTACGCCCGCACCTACCTCGCAGACCTCCTCCCTCTCTGCATCACCAAAATTGTTTACCTCGACTCCGACTTAATCCTCGTCGACGACATTGCAATACTCTCCTCTACACCTCTTCATCCAACCACCGTCCTCGCCGCACCGGAGTATTGCACCGCGAATTTCAGCAACTATTTCACTCCATCGTTTTGGTCAAACCCTTCACTTTCACTCACATTCGCCAACCGTGAACGTAAAGCTTGTTACTTCAACACCGGAGTTATGGTCATTGATCTTCACCGGTGGCGTTCCGGTGACTACACGACGATGATACGTGAGTGGATGGAGTTGCAGAAGAGAATGAGGATCTATGAGCTGGGTTCATTGCCGCCGTTTTTGCTTGTTTTTGCGGGGAGGATTACGCCGGTGGATCACCGGTGGAATCAGCATGGGCTTGGCGGTGATAATTTTCGTGGGCTTTGTCGGGATTTGCATCCAGGCCCGGTGAGTTTGTTGCATTGGAGTGGAAAGGGAAAACCGTGGGCCAGGCTTGATGGGAATAGGGCTTGTCCTTTGGATGCTTTGTGGGCTCCATATGATTTGTTGAAGACTCGTTTTGCTCTTGAGGTGTAG 1029 0.4781 MRFLILILCILILLSTNTLCTTTTLEQDFKEAPKFYNSPICTTIESNNHTCSISAVHVAMTLDVSYIRGSMAAILSILQHSSCPENIVFHFITSASVSILNRTITNSFPYLKYQIYPFNDAPVAGLISTSIRSALDTPLNYARTYLADLLPLCITKIVYLDSDLILVDDIAILSSTPLHPTTVLAAPEYCTANFSNYFTPSFWSNPSLSLTFANRERKACYFNTGVMVIDLHRWRSGDYTTMIREWMELQKRMRIYELGSLPPFLLVFAGRITPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDGNRACPLDALWAPYDLLKTRFALEV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3494 342 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 57 322 IPR029044 -
Mal5g3494 342 SUPERFAMILY Nucleotide-diphospho-sugar transferases 56 334 IPR029044 -
Mal5g3494 342 Pfam Glycosyl transferase family 8 57 315 IPR002495 GO:0016757
Mal5g3494 342 PANTHER HEXOSYLTRANSFERASE 5 342 - -
Mal5g3494 342 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 5 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3494 Mal-Chr5 100414350 100415378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3494 27 340 Glycosyltransferase AT3G50760 72.468 9.03e-176 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3494 K20893 - gmx:100783054 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3494 5 100414350 100415378 Mal5g3494 5 100414350 100415378 ECH
Mal7g1376 7 43131203 43132300 Mal5g3494 5 100414350 100415378 PCT