Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3489 ATGAGTGCTGTGAATCTAAACACATGGACACACTCCAATTTCATGTTCAATCAAGTTACTACTGCTACAACAAGATCCAGATCCAGAATCTCAACTTTTTATTTTACGAAAATACCCATTTCATTTTCACCCATTAAACCACAAACCCATAATCAATTCAACAAATTTTCTGTTTCATCATTACTCACAAAACAAGAACCAATAGAAGCTGAAGAAGAAAACCCAATCTTCAATTTCAAATCCTACATGATAGAAAAAGCAAATAGGGTTAACAAAGCCTTAGACGACGCCGTTTCATTACGCGAACCATTAAAAGTCCACGAAGCCATGCGTTACTCTCTCCTCGCCGGCGGAAAACGCGTCCGGCCAGTTCTCTGTTTAGCCGCCTGTGAACTCGTCGGCGGAACCGAATCCATGGCGATGCCAGCCGCCTGCGCCGTCGAAATGATCCACACCATGTCTCTCATCCACGACGACCTTCCTTGTATGGATAACGACGATCTCCGGCGAGGAAAACCTACAAACCACAAAGTCTTCGGAGAAGACGTTGCTGTTCTCGCCGGAGATGCTCTCCTCGCTTTTGCCTTCGAACACATCGCCGTCTCCACCGCCGGTGTTTCTCCGGCGAGAATTATCCGTGCAATCGGAGAATTAGCGAAATCAATCGGCTCAGAAGGACTTGTCGCCGGACAAGTCGTTGATATCCACTCCGAAGGTTTATCCGATGTGGGATTAGAGAGACTTGAATTTATTCACTTGCATAAAACTGCAGCGTTGTTAGAAGGTGCTGTTGTTCTTGGTGCAATTTTAGGTGGTGGTTGTGATGAAGATGTTGAAAAACTGCGAAAATTCGCGAGATATATTGGTTTATTGTTTCAGGTTGTTGATGATATTCTTGATGTGACGAAATCTTCACAGGAGTTAGGTAAAACTGCTGGGAAAGATTTGGTTGCTGATAAGGTTACTTATCCTAAGCTGTTGGGGATCGAGAAATCGAAAGAGTTTGCTGAGAAATTGAACCGTGATGCACAAGATCAGCTTTCTGGGTTTGATTCAAGTAAATCTGCTCCTTTGATTGCTTTGGCTAATTACATTGCTTATAGGCAAAACTAA 1113 0.4349 MSAVNLNTWTHSNFMFNQVTTATTRSRSRISTFYFTKIPISFSPIKPQTHNQFNKFSVSSLLTKQEPIEAEEENPIFNFKSYMIEKANRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVGGTESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTAGVSPARIIRAIGELAKSIGSEGLVAGQVVDIHSEGLSDVGLERLEFIHLHKTAALLEGAVVLGAILGGGCDEDVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAEKLNRDAQDQLSGFDSSKSAPLIALANYIAYRQN* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3489 370 ProSitePatterns Polyprenyl synthases signature 2. 288 300 IPR033749 -
Mal5g3489 370 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC-LIKE 1 370 - -
Mal5g3489 370 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 1 370 - -
Mal5g3489 370 Gene3D Farnesyl Diphosphate Synthase 76 370 IPR008949 -
Mal5g3489 370 SFLD Isoprenoid Synthase Type I 81 368 - -
Mal5g3489 370 Pfam Polyprenyl synthetase 106 339 IPR000092 GO:0008299
Mal5g3489 370 SUPERFAMILY Terpenoid synthases 79 352 IPR008949 -
Mal5g3489 370 ProSitePatterns Polyprenyl synthases signature 1. 155 171 IPR033749 -
Mal5g3489 370 SFLD Polyprenyl Transferase Like 81 368 - -
Mal5g3489 370 CDD Trans_IPPS_HT 106 368 IPR000092 GO:0008299
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3489 Mal-Chr5 100270313 100271425 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3489 K13789 - gmx:100785539 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3489 5 100270313 100271425 Mal5g3489 5 100270313 100271425 ECH
Mal7g1382 7 43259137 43260258 Mal5g3489 5 100270313 100271425 PCT