Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3469 ATGGTGCACAGTGCCTACGATTCCTTCGAGCTTCTCACCGACTCACCCTCCAAAATCGAATCCATTGAATCCTACGGTTCCAAACTCCTCTTAGGATGCTCCGACGGATCTCTCCTCGTTTACGCGCCGGAGAGTTCCGAGCCGGCGCCGGAGGAAATGCGGAAGGAAGCGTATGTATTAGAGAGAAACGTAAACGGATTCGCGAAGAAGCCTGTGGTGTCAATGCAGGTGGTGGAATCGAGAGAGCTTCTTCTTTCGTTATCGGAATCCATTGCGTTTCATAAACTTCCTTCGTTTGAAACTACTGCGGTTATTACGAAAGCGAAAGGCGCTAATGCTTTTTGTTGGGATGAATGTAGAGGATTCTTGTGTTTTGCTAGGCAAAAGCGTGTTTGTATCTTTAGACATGACGGTGGTAGAGGATTTGTGGAGGTGAAAGACTTTGGTGTTCCTGATGTGGTGAAGTCAATGAGTTGGTGCGGTGAGAATATATGTTTGGGAATTAGAAAAGAGTATGTGATTCTGAATGCTACAAGTGGTGCAATATCTGAAGTTTTTACTTCTGGGAGGCTAGCTCCACCTTTGGTGGTATCTCTTCCTTCCGGAGAGCTCCTTCTGGGCAAGGAGAACATTGGTGTCATTGTGGACCAAAACGGAAAACTACGTCCAGAAGGTAGGATTTGTTGGTCAGAGGCCCCAGCAGAAGTTGTAATTCAGAAGGCATATGCTTTAGCCCTGCTGCCAAGATTTGTGGAGATTCGATCTCTCCGAGGTCCATATCCTTTGATACAAACAGTAGTTTTGCAAAATGTTCGCCATCTTCGCCAGAGCAACAATTCAGTGATTATTGCTTTAGAAAATTCTGTTCATGGCCTCTTTGCCGTTCCAATTGGAGCCCAGATTGTCCAATTAACAGCCGCTGGTAACTTCGAAGAAGCTTTGTCATTGTGCAAGCTCCTTCCTCCTGAAGATTCAAATCTTCGTGCTGCAAAGGAGGCTTCAATTCATATAAGATATGCCCACTATCTTTTTGACAACGGCAGCTATGAGGAGTCAATGGAACAATTCCTAGCATCTCAAGTAGATATAACTCACGTGCTTTCTCTGTACACATCAATTATCCTTCCGAAGACAACTGCTGTTCATGATCCAGATAAGTCGGACACTTTTGGGGATGCTTCGTACCTGTCCAGTGGTTCTTCGGCTATGTCTGATGATATGGAACCTTTTCCAGCATCTAATATGTCAGAATTAGATGACAATGCAGAACTTGAATCGAAAAAAATGAGCCATAATATGCTTATGGCTCTCATAAAATATTTGCAGAAGAAGAGACATAGTATTATTGAGAAGGCCACTTCAGAAGGAACTGAGGAAGTTGTTTTTGATGCTGTTGGTAATAACTTTCGATCCTATAGCAGTAATAGGCTTAAGAAAAGAAACAAGTATCAGGGTCGTGGTAGTATACCTGTTAGTTCGGGAGCTCGGGAGATGGCTGCAATATTGGATACTGCTTTACTCCAAGCTTTGCTCCTAACTGGACAACCTTCTATGGCTGAAAATTTGTTGAGAGGTCTTAGCTACTGTGATTTGAAAATATGTGAAGAGATACTTCAAGAAGGTAGTTATCATGTTGCTTTAGTCGAACTTTACAAGTGCAACTCCATGCACCGGGAAGCCCTTGAACTTATTAATAAATTGGTGAAAGAATCAAAGTCTAGCCAGTCTAAGATTGCACATAGATTCAAGCCCGAGGCCATCATCGAGTACCTCAAGCCACTTTGTGAAACAGACCCAACACTTGTTCTAGAGTACTCCATGCTTGTTCTTGAAAGCTGCCCAACCCAAACAATTGAGCTCTTTTTGTCTGGAAATATTCCAGCAGATATGGTTAACTTATATTTGAAGCAACATGCTCCAGACTTGCAAGCCAGATACTTGGAACTGGTGCTTGCAATGAATGAGGATGCAGTATCTGGAACTTTGCAAAATGAAATGGTACATATCTATCTTTCTGAGGTACTTGATTGGCACACTGATTTAAGTTCTCAACAGAAATGGGACGAGAAAGTTTATTCCCCGAAAAGGAAAAAATTACTTTCTGCCTTGGAGAGTATATCAGGATATAATCCAGAAGCTCTGCTGAAACTTATTCCATCAGATGCTTTATACGAAGAGCGGGCAATATTGTTGGGAAAAATGAACCAACATGAACTAGCATTATCTTTGTATGTTCATAAGCTTCATGTTCCAGAACTGGCATTGTCTTATTGCGATCATGTGTATGAATCTACCCATAAGCCTTCTGTAAAATCTCCCAGCAACATATACCTAATGCTTCTGCAAATCTATTTGAATCCACGGAGGACGACCAAGAACTACGAAAAGAGAATTTCAAATCTATTATCCCCCCGGAGTAAATCCATTACAAGGGTTACTTCAAAATCATTATCAAAAACCAGAAGCCGAGGATCAAGGAAAATTGCTGCAATAGAGGTTGCAGAGGACACAAAAGCTAGTCAGAGTAGCGACAGTGGCAGGAGTGATGCTGACACAGATGAGTTTACTGTGGAAGGAGTTATCATGCTTGATGAGGCCCTCGATTTGTTAAGCCGCAGATGGGATAGAATCAATGGAGCCCAGGCACTTAAACTCCTACCAAAAGAGACCAAACTGCAGAGCTTGCTTCCATTTCTCGGACCCCTTGTGAGAAAATCTAGCGAAATGTATCGTAATTGCTCAGTTGTCAGGAGCTTGAGACAGACTGAGAATCTTCAGGTGAAAGATGAACTCTACAATAAGAGAAAAGCAGTTATGAAGATTAGCGGTGATGACATGTGTTCCTTGTGCCATAAGAAAATAGGGACTAGTGTTTTTGCAGTTTATCCGAATGGGAAAACTCTAGTGCATTTTGTCTGTTTCAGAGATTCTCAAAGTATGAAAGCTGTGGCCAAAGGGTCTCCATGGAAAAAGGCATTTTGA 2982 0.4229 MVHSAYDSFELLTDSPSKIESIESYGSKLLLGCSDGSLLVYAPESSEPAPEEMRKEAYVLERNVNGFAKKPVVSMQVVESRELLLSLSESIAFHKLPSFETTAVITKAKGANAFCWDECRGFLCFARQKRVCIFRHDGGRGFVEVKDFGVPDVVKSMSWCGENICLGIRKEYVILNATSGAISEVFTSGRLAPPLVVSLPSGELLLGKENIGVIVDQNGKLRPEGRICWSEAPAEVVIQKAYALALLPRFVEIRSLRGPYPLIQTVVLQNVRHLRQSNNSVIIALENSVHGLFAVPIGAQIVQLTAAGNFEEALSLCKLLPPEDSNLRAAKEASIHIRYAHYLFDNGSYEESMEQFLASQVDITHVLSLYTSIILPKTTAVHDPDKSDTFGDASYLSSGSSAMSDDMEPFPASNMSELDDNAELESKKMSHNMLMALIKYLQKKRHSIIEKATSEGTEEVVFDAVGNNFRSYSSNRLKKRNKYQGRGSIPVSSGAREMAAILDTALLQALLLTGQPSMAENLLRGLSYCDLKICEEILQEGSYHVALVELYKCNSMHREALELINKLVKESKSSQSKIAHRFKPEAIIEYLKPLCETDPTLVLEYSMLVLESCPTQTIELFLSGNIPADMVNLYLKQHAPDLQARYLELVLAMNEDAVSGTLQNEMVHIYLSEVLDWHTDLSSQQKWDEKVYSPKRKKLLSALESISGYNPEALLKLIPSDALYEERAILLGKMNQHELALSLYVHKLHVPELALSYCDHVYESTHKPSVKSPSNIYLMLLQIYLNPRRTTKNYEKRISNLLSPRSKSITRVTSKSLSKTRSRGSRKIAAIEVAEDTKASQSSDSGRSDADTDEFTVEGVIMLDEALDLLSRRWDRINGAQALKLLPKETKLQSLLPFLGPLVRKSSEMYRNCSVVRSLRQTENLQVKDELYNKRKAVMKISGDDMCSLCHKKIGTSVFAVYPNGKTLVHFVCFRDSQSMKAVAKGSPWKKAF* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3469 993 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 605 792 IPR000547 GO:0006886|GO:0016192
Mal5g3469 993 ProSiteProfiles Citron homology (CNH) domain profile. 16 281 IPR001180 -
Mal5g3469 993 PANTHER CNH DOMAIN CONTAINING 1 991 IPR032914 GO:0016192
Mal5g3469 993 Pfam CNH domain 26 274 IPR001180 -
Mal5g3469 993 Pfam Vacuolar sorting protein 39 domain 2 867 975 IPR019453 -
Mal5g3469 993 Pfam Region in Clathrin and VPS 630 761 IPR000547 GO:0006886|GO:0016192
Mal5g3469 993 Pfam Vacuolar sorting protein 39 domain 1 502 610 IPR019452 -
Mal5g3469 993 PANTHER VACUOLAR SORTING PROTEIN 39 1 991 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3469 Mal-Chr5 99766343 99774874 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3469 K20183 - gmx:100805342 1504.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3469 5 99766343 99774874 Mal5g3469 5 99766343 99774874 ECH