Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3453 ATGGGTCTTCTCCAGATCATTCGAAAAATCAAAAAGAAGGAGAAGGAAATGCGAATTCTTATGGTTGGGTTGGACAATTCTGGGAAAACTACAATTGTTTTGAAGATTAATGGGGAGGACACTAGTGTTATCAGTCCTACCCTTGGCTTCAACATCAAAACCATCGCCTACCAGAAGTACACTCTAAATATATGGGATGTTGGGGGCCAAAAAACAATTCGATCTTACTGGAGAAACTACTTTGAGCAAACAGATGGTTTGGTTTGGGTAGTTGACAGTTCGGATCTGAGAAGGTTGGATGATTGCAAAATGGAGCTAGATAACCTTCTAAAGGAAGAGAGATTATCTGGATCATCCTTACTAATTCTAGCAAATAAACAAGATATTAAAGGCGCCCTTGCACCAGAAGAAATAGCTAAGGTGTTGAACTTGGAAGCTATGGATAAATCTCGGCACTGGATGATAGTTGGCTGTAGTGCATTCACTGGTGAGGGTCTGCTTGAGGGATTTGATTGGTTGGTCCAGGACATAGCCTCTAGAATCTACTTGCTCGACTAA 558 0.4122 MGLLQIIRKIKKKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIAYQKYTLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGSSLLILANKQDIKGALAPEEIAKVLNLEAMDKSRHWMIVGCSAFTGEGLLEGFDWLVQDIASRIYLLD* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3453 185 ProSiteProfiles small GTPase Arf family profile. 10 177 - -
Mal5g3453 185 PANTHER ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2 1 184 - -
Mal5g3453 185 PRINTS GTP-binding SAR1 protein signature 73 98 IPR006689 GO:0003924|GO:0005525
Mal5g3453 185 PRINTS GTP-binding SAR1 protein signature 18 41 IPR006689 GO:0003924|GO:0005525
Mal5g3453 185 PRINTS GTP-binding SAR1 protein signature 46 70 IPR006689 GO:0003924|GO:0005525
Mal5g3453 185 PRINTS GTP-binding SAR1 protein signature 151 175 IPR006689 GO:0003924|GO:0005525
Mal5g3453 185 PANTHER ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-RELATED 1 184 IPR044612 GO:0003924
Mal5g3453 185 Pfam ADP-ribosylation factor family 4 177 IPR006689 GO:0003924|GO:0005525
Mal5g3453 185 TIGRFAM small_GTP: small GTP-binding protein domain 15 151 IPR005225 GO:0005525
Mal5g3453 185 CDD Arl2 17 176 IPR045873 GO:0003924
Mal5g3453 185 Gene3D - 4 182 IPR027417 -
Mal5g3453 185 SMART arf_sub_2 1 181 - -
Mal5g3453 185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 179 IPR027417 -
Mal5g3453 185 SMART sar_sub_1 3 177 IPR006689 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3453 Mal-Chr5 99636385 99638908 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3453 K07943 - qsu:111998837 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3453 5 99636385 99638908 Mal5g3453 5 99636385 99638908 ECH